FC876220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876220 vs. ExPASy Swiss-Prot
Match: THS2_ARAHY (Putative stilbene synthase 2 (Fragment) OS=Arachis hypogaea PE=5 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.932e-59 Identity = 86/106 (81.13%), Postives = 97/106 (91.51%), Query Frame = 3 Query: 279 LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 596 LKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L L+GL PSVKR+MMY QGCFAGGTVLRLAKDLAENN+ Sbjct: 1 LKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNK 106 HSP 2 Score: 66.2402 bits (160), Expect = 1.932e-59 Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 2 Query: 599 ARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 715 ARVL+VCSE TAVTFRGP++T +DSLVGQALF DGAAA+ Sbjct: 108 ARVLIVCSENTAVTFRGPSETDMDSLVGQALFADGAAAI 146
BLAST of FC876220 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.950e-54 Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 3 Query: 363 LGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 596 LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN+ Sbjct: 1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 78 HSP 2 Score: 78.9518 bits (193), Expect = 2.950e-54 Identity = 37/41 (90.24%), Postives = 41/41 (100.00%), Query Frame = 2 Query: 593 QGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 715 +GARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFGDGAAA+ Sbjct: 78 KGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 118
BLAST of FC876220 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.450e-40 Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 3 Query: 420 ITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 596 ITHLI CTTS VDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN+ Sbjct: 1 ITHLIVCTTS-VDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 58 HSP 2 Score: 78.9518 bits (193), Expect = 1.450e-40 Identity = 37/41 (90.24%), Postives = 41/41 (100.00%), Query Frame = 2 Query: 593 QGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 715 +GARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFGDGAAA+ Sbjct: 58 KGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 98
BLAST of FC876220 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.843e-25 Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 2 Query: 593 QGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 715 +GARVLVVCSEITAVTFRGP+DTHLDSLVGQALFGDGAAAV Sbjct: 25 KGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAV 65 HSP 2 Score: 53.9138 bits (128), Expect = 9.843e-25 Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 3 Query: 522 MMYQQGCFAGGTVLRLAKDLAENNR 596 MMYQQGCFAGGTVLRLAKDLAENN+ Sbjct: 1 MMYQQGCFAGGTVLRLAKDLAENNK 25
BLAST of FC876220 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.335e-18 Identity = 54/193 (27.98%), Postives = 97/193 (50.26%), Query Frame = 3 Query: 9 KHEPQTYSLRVQLEMATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYIYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 587 +H+ Q ++V ++ R + +++ + VL IG + P ++Q D + E EK KR+ ++S IK R++ + + EN ++ D V VP L ++A +A+K+WG K ITH++ T++G+ +P +++L L+GL V+R + GC AG + LR A LA+ Sbjct: 2758 QHQKQQQKVQV-IQQQQQPLSRLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRHL-VRDYTKPENSIKFRHLETITDVNNQFKKV-VPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAK 2945 HSP 2 Score: 29.6462 bits (65), Expect = 2.335e-18 Identity = 14/37 (37.84%), Postives = 23/37 (62.16%), Query Frame = 2 Query: 602 RVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 712 R+LVVC+E+ ++ F D +V ++F DG+AA Sbjct: 2951 RILVVCTEVCSLHFSNTDGG--DQMVASSIFADGSAA 2985 The following BLAST results are available for this feature:
BLAST of FC876220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876220 ID=FC876220; Name=FC876220; organism=Citrus clementina; type=EST; length=716bpback to top |