FC876224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_ECHMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Echinococcus multilocularis PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.329e-28 Identity = 67/144 (46.53%), Postives = 88/144 (61.11%), Query Frame = 3 Query: 78 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 K ++GINGFGRIGRLV R + + V +VAVNDPFI +YM YM KYDS HG++K ++KV D L+ +TVF + +PW++ GAEY+VESTG+ T VIISAPS D+ VGVN +Y P + Sbjct: 2 KPQVGINGFGRIGRLVLRAAVASNSVNVVAVNDPFIDLEYMVYMFKYDSAHGRYK-GDVKV-DGGKLVIDSHRITVFQEMSASAVPWSQAGAEYIVESTGINTTVEKASAHFQGGAKKVIISAPSADSSHVRVGVNHEKYDPSM 143
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_DICDI (Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 5.049e-28 Identity = 62/140 (44.29%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYK 500 V IGINGFGRIGRLV R L+ + ++A+N+PF+ YM YM KYDS HG++K + + + + VF ++P I W+ GAEY+VESTG+F V+ISAPS DAPM+V+GVNE Y+ Sbjct: 3 VPIGINGFGRIGRLVLRASLENPECRVLAINEPFMDVKYMVYMFKYDSTHGRFKGTVEDINGE--FVVNGNKIHVFAEKDPANIKWSSVGAEYIVESTGLFLSTEKAGVHLKGGAKKVVISAPSTDAPMYVMGVNEETYE 140
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 6.594e-28 Identity = 66/134 (49.25%), Postives = 84/134 (62.69%), Query Frame = 3 Query: 108 RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 RIGRLV R V++VA+NDPFI +YM YM +YDS HG++K +K ++ K ++ G K +T+F R+P I W + GAEYVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 1 RIGRLVTRAAFTSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFKG-TVKAENGKLVING-KAITIFQERDPTNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHDKYDNSL 132
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_SHEEP (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ovis aries GN=GAPDH PE=2 SV=4) HSP 1 Score: 122.479 bits (306), Expect = 1.125e-27 Identity = 65/133 (48.87%), Postives = 82/133 (61.65%), Query Frame = 3 Query: 111 IGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 IGRLV R V++VA+NDPFI YM YM +YDS HG++ H +K ++ K ++ G K +T+F R+P I W + GAEYVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 1 IGRLVTRAAFNTGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKKVIISAPSADAPMFVMGVNHEKYNNTL 131
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P1_GIALA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giardia lamblia GN=GAP1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.125e-27 Identity = 65/141 (46.10%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 503 +++GINGFGRIGR+ R L D V++VA+NDPF +YM YM KYD+VHG++ + +D + G K ++VF PEEIPW +T + V+E TG FT VIISAPS DAPMFV G N Y P Sbjct: 3 IRLGINGFGRIGRMALRASLNIDGVQVVAINDPFTDCEYMEYMLKYDTVHGRF-DGTIAHSEDSITVNGNK-ISVFKSMKPEEIPWGKTQVDIVLECTGRFTTKKDAELHITGGCKRVIISAPSADAPMFVCGCNLETYDP 141
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.469e-27 Identity = 64/123 (52.03%), Postives = 78/123 (63.41%), Query Frame = 3 Query: 138 LQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 506 L+ ++ + AVNDPFI DYM YM KYDSVHG+++ E+ KD K ++ G K +TVF R+P IPW GA+YVVESTGVFT VIISAPS DAPMFV GVN Y P+ Sbjct: 1 LENPEINITAVNDPFIDLDYMVYMFKYDSVHGRFEG-EVSTKDGKLVING-KAITVFAERDPANIPWGTVGAQYVVESTGVFTTIEKASAHLKGGAKKVIISAPSSDAPMFVCGVNLDAYDPK 121
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.274e-27 Identity = 61/119 (51.26%), Postives = 78/119 (65.55%), Query Frame = 3 Query: 150 DVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 506 D+++VA+NDPFI YM YM KYDSVHG++ ++ KD K L +KP+TVF R+P +IPW GAEY+VESTGVFT ++ISAPS DAPMFV GVN +Y P+ Sbjct: 4 DLDVVAINDPFIDLAYMVYMFKYDSVHGRFSG-SVETKDGK-LWINQKPITVFRKRDPVQIPWGSAGAEYIVESTGVFTTTEKASAHLKGGAKKIVISAPSADAPMFVCGVNLDKYDPK 120
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 7.290e-27 Identity = 70/144 (48.61%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVAR-VILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 506 +KIGINGFGRIGR+V R I D+E+VA+ND + DY+ YM KYDSVHG++ E+ V D TL+ K + + V++P E+ W E GA+ VVESTG+F VI+SAPSK D PMFV GVN YK E Sbjct: 3 IKIGINGFGRIGRMVFRAAIANFKDIEVVAIND-LLEPDYLAYMLKYDSVHGRF-DGEVSV-DGNTLVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIFLTKEGAQKHIDAGAKKVIMSAPSKDDTPMFVYGVNHGTYKGE 143
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 9.522e-27 Identity = 66/146 (45.21%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 72 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 M + GINGF L+ V++VA+NDPFI +YM YM KYDS HG++K ++ KD K ++ G + + V R+P +IPW GA+YV+ESTGVFT VIISAPS DAPMFVVGVN +Y +L Sbjct: 1 MSTINTGINGFRSHWPYCLACSLENPKVKVVAINDPFIDLEYMVYMFKYDSTHGRFKG-TVEHKDGKLVVNGHE-IAVHAERDPAQIPWGSHGADYVIESTGVFTTKDAASAHLKGGAKKVIISAPSADAPMFVVGVNLDKYTSDL 144
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P2_DROSU (Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) OS=Drosophila subobscura GN=Gapdh2 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.121e-26 Identity = 65/134 (48.51%), Postives = 81/134 (60.45%), Query Frame = 3 Query: 108 RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 RIGRLV R + + +VAVNDPFI +YM Y+ K+DS HG++K V + L+ + +TVF R+P I WA GAEYVVESTGVFT V+ISAPS DAPMFV GVN YKP++ Sbjct: 1 RIGRLVLRAAIDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKG--TVVAEGGFLVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYKPDM 131 The following BLAST results are available for this feature:
BLAST of FC876224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876224 ID=FC876224; Name=FC876224; organism=Citrus clementina; type=EST; length=509bpback to top |