FC876224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P2_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain COL) GN=gapA2 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.419e-14 Identity = 44/139 (31.65%), Postives = 74/139 (53.24%), Query Frame = 3 Query: 87 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHE 494 I ING GRIGR+V R+ LQ ++ +VA+N + + + ++ YD+ HG+ + LKV+ + L G+ + + RNPE +PW E + +++TG F V+++ PSK M V GVN+++ Sbjct: 5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDNQ 139
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_ZYMMO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zymomonas mobilis GN=gap PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 9.244e-14 Identity = 53/142 (37.32%), Postives = 74/142 (52.11%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVV-GVNEHE 494 VK+ INGFGRIGRL AR IL R D +ELV +ND + + ++ K DS HG + +D ++ K + V R+P +P + G + V+E TG+FT V+ISAP+K D VV GVN + Sbjct: 3 VKVAINGFGRIGRLAARAILSRPDSGLELVTIND-LGSVEGNAFLFKRDSAHGTYPGTVTTEGND--MVIDGKKIVVTAERDPANLPHKKLGVDIVMECTGIFTNTEKASAHLTAGAKKVLISAPAKGDVDRTVVYGVNHKD 141
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P2_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MRSA252) GN=gapA2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 9.244e-14 Identity = 44/139 (31.65%), Postives = 73/139 (52.52%), Query Frame = 3 Query: 87 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHE 494 I ING GRIGR+V R+ LQ ++ +VA+N + + + ++ YD+ HG+ + LKV+ + L G+ + + RNPE +PW E + +++TG F V+++ PSK M V GVN+ + Sbjct: 5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDDQ 139
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPW (D-erythrose-4-phosphate dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=epd PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 9.244e-14 Identity = 46/148 (31.08%), Postives = 81/148 (54.73%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---DAPMFVVGVNEHEYKPE 506 +++ ING+GRIGR + R + + RD +++VA+N+ + M ++ +YD+ HG++ H ++K+ D++ ++ G+ + + NP +PW E + V E+TGV V+IS PS DA + V GVN+ K E Sbjct: 2 IRVAINGYGRIGRSILRAVYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DEQHMIIGDDAIKLLHEPNPANLPWQEMDIDIVFEATGVINDRQACEAHIEAGARQVLISHPSSSDVDATI-VYGVNQDLLKAE 145
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_TREPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Treponema pallidum GN=gap PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.207e-13 Identity = 51/152 (33.55%), Postives = 74/152 (48.68%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRD----DVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR-NPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP------SKDAPMFVVGVNEHEYKP 503 +++ INGFGRIGRLV + + ++ + ++ AV D Y Y KYDSV G+ +D + G + V G P ++PW + G E V+E+TG++ VIISAP SK V+GVNEHE+ P Sbjct: 1 MRVAINGFGRIGRLVLQAMAEQKLLGKEFDVAAVVDLSTDARYFAYQLKYDSVQGKMGSSLSAPAEDILEVGGHRIKCVCGRGLKPSQLPWKDLGIEVVIEATGIYA-NESSYGHLEAGAKRVIISAPAKSSDASKPVKTIVMGVNEHEFDP 151
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: E4PD_PSEHT (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=epd PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.690e-13 Identity = 44/147 (29.93%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQR---DDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD--APMFVVGVNEHEYKPE 506 +K+ INGFGRIGR + R + + +++++VA+N+ + + ++ KYD+ HG++ +K+ +D + G+ + +F NP E+PW G + V+E TGV+ V+ S P+ + V G+N+ E KPE Sbjct: 3 IKLAINGFGRIGRNIVRALYESGLSNEIKIVAINE-LADPEAIAHLLKYDTSHGRF-FFPVKLGEDTISVAGDA-IALFCEPNPAELPWKTLGVDVVLECTGVYHSREHAQLHLTAGAKKVLFSHPADNDVDATIVYGINDDELKPE 146
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: E4PD_SHEHH (D-erythrose-4-phosphate dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=epd PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.513e-13 Identity = 43/147 (29.25%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD--APMFVVGVNEHEYKPE 506 +++ ING+GRIGR + R + + RD +++VA+N+ + M ++ +YD+ HG++ H ++K+ D++ ++ G+ + + NP +PW E + V E+TGV V+IS PS + V GVN+ + E Sbjct: 2 IRVAINGYGRIGRSILRALYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DNQHMIIGDDAIKLLHEPNPANLPWKELDIDIVYEATGVINDRQECEAHLKAGAKQVLISHPSSNDVDATIVYGVNQDLLRAE 145
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=epd PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.588e-13 Identity = 45/148 (30.41%), Postives = 82/148 (55.41%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---DAPMFVVGVNEHEYKPE 506 +++ ING+GRIGR + R + + RD +++VA+N+ + M ++ +YD+ HG++ H ++K+ D++ ++ G+ + + +P ++PW E + V E+TGV V+IS PS DA + V GVN+ K E Sbjct: 2 IRVAINGYGRIGRSILRALYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DNQHMIIGDDAIKLLHEPDPAKLPWKEMDIDIVFEATGVINDRLECEAHIQAGAKQVLISHPSSSDVDATI-VFGVNQDLLKAE 145
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: E4PD_AERHH (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=epd PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.992e-13 Identity = 46/141 (32.62%), Postives = 82/141 (58.16%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ--RD-DVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---DAPMFVVGVN 485 +KI ING+GRIGR V R + + RD ++++VA+N+ + M ++ ++D+ HG++ HH +++ + ++L GE +++F R+P +PW G + V++ TGVF V+ S P++ DA + V GVN Sbjct: 2 IKIAINGYGRIGRNVLRALYESGRDKNIKIVAINE-LAAPEAMVHLTRFDTSHGRF-HHPVQLAGN-SMLVGEDLISLFAERDPSRLPWRALGVDVVLDCTGVFGSRADAELHLAAGAGKVLFSHPAEADVDATI-VYGVN 138
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P1_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MW2) GN=gapA1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.743e-12 Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHE 494 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ D V N E Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138 The following BLAST results are available for this feature:
BLAST of FC876224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876224 ID=FC876224; Name=FC876224; organism=Citrus clementina; type=EST; length=509bpback to top |