FC876233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 1.973e-59 Identity = 116/166 (69.88%), Postives = 124/166 (74.70%), Query Frame = 3 Query: 168 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 KDYTDPPP PLFD EL WSFYRALIAEFIA IGYK Q+ + D C GVG LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKVS++RAVMY+VAQCLG I GVG+VK K Y GGGAN +A GYSTG L AEIIGTFVL Sbjct: 15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQS----SADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVL 176
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.740e-59 Identity = 115/181 (63.54%), Postives = 133/181 (73.48%), Query Frame = 3 Query: 123 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 ++++ V +HG KDY DPPP P FD EL WSF+RA IAEFIA IGYK +TDP CA VG+LGIAW+FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL+RA++YM+AQC GAI GVGLVKAF K Y ++GGGAN +A GY+ G AE+IGTFVL Sbjct: 6 ISEEGQVHQHG----KDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDP------CASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVL 176
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.113e-53 Identity = 112/183 (61.20%), Postives = 126/183 (68.85%), Query Frame = 3 Query: 117 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 FP + G + + KDY +PPP PLF+ EL+ WSFYRA IAEFIA +G K A N+ CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAI G G+VK FQ + Y GGGAN +A GY+ G GL AEIIGTFVL Sbjct: 15 FPERQPIGTSAQST--DKDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVL 189
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 4.707e-53 Identity = 108/176 (61.36%), Postives = 123/176 (69.89%), Query Frame = 3 Query: 138 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 G A G+ KDY +PPP PLF+A ELT WSFYRA IAEF+A +G +K+ CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAI G G+VK FQ+ Y GGGAN + GY+ G GL AEI+GTFVL Sbjct: 22 GTAAQGT-EEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGV------SKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVL 190
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 207.608 bits (527), Expect = 4.707e-53 Identity = 109/183 (59.56%), Postives = 123/183 (67.21%), Query Frame = 3 Query: 117 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 F + G A GS KDY +PPP PLF+ EL WSFYRA IAEF+A +G + T CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAI G G+VK FQK Y GGGAN +A GY+ G GL AEI+GTF+L Sbjct: 15 FSERQPIGTAAQGS-DDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSK------CATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFIL 190
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.147e-53 Identity = 110/183 (60.11%), Postives = 125/183 (68.31%), Query Frame = 3 Query: 117 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 FP + G + + S KDY +PPP PLF+ EL WSF+RA IAEFIA +G K ++ + CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAI G G+VK FQ Y GGGAN +A GY+ G GL AEIIGTFVL Sbjct: 15 FPERQPIGTS---AQSDKDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVL 188
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.147e-53 Identity = 105/176 (59.66%), Postives = 122/176 (69.32%), Query Frame = 3 Query: 138 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 G A G+ KDY +PPP PLF+ EL WSFYRA IAEF+A +G +K+ CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ+ Y GGGAN +A GY+ G GL AEI+GTF+L Sbjct: 22 GTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGV------SKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFIL 191
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.028e-53 Identity = 104/183 (56.83%), Postives = 124/183 (67.76%), Query Frame = 3 Query: 117 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 F + G A G+ KDY +PPP PLF+ EL WSFYRA IAEF+A +G +K+ CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGA+ G G+VK FQ+ Y GGGAN +A GY+ G GL AEI+GTF+L Sbjct: 15 FSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGV------SKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFIL 191
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.369e-52 Identity = 111/183 (60.66%), Postives = 126/183 (68.85%), Query Frame = 3 Query: 117 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 FP + G + + + KDY +PPP P F+ EL+ WSFYRA IAEFIA +G K A N+ CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAI G G+VK FQ + Y GGGAN +A GY+ G GL AEIIGTFVL Sbjct: 15 FPERQPIGTS---AQTDKDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVL 188
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 1.788e-52 Identity = 104/174 (59.77%), Postives = 120/174 (68.97%), Query Frame = 3 Query: 147 EHGSYSAK-DYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 E G+ +AK Y DPPP PL D EL KWS YRALIAEF+A IGYK+Q VD C GVG LG+AW+FG IFVLVYCT G+SGGHINPAVT GLF RK+SLVR V+Y+VAQCLGAI+G G+VK K Y GGGAN ++DGYS L AEI+GTF+L Sbjct: 13 EGGAAAAKAPYWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQR---ATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFIL 183 The following BLAST results are available for this feature:
BLAST of FC876233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876233 ID=FC876233; Name=FC876233; organism=Citrus clementina; type=EST; length=665bpback to top |