FC876233

Overview
NameFC876233
Unique NameFC876233
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10210 contig Ccv1_Contig10210:12..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.809e-12
Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 3
Query:  213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665
            E+   +F +A+ AEF+A            + + S           A   +L I+ AFG  I  +      +SGGH+NPA+T  L +  ++SL+RAV Y+VAQ +GAI+G  ++      Y  R     N L +  + G  + AE+I TF L
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSALKWPS-----------AMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL-APYNARSNLAVNALNNNTTAGQAVVAEMILTFQL 142          
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.809e-12
Identity = 50/151 (33.11%), Postives = 72/151 (47.68%), Query Frame = 3
Query:  213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665
            E+   +F +A+ AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+VAQ +GAI+G G++         R     N L +  + G  +  E+I TF L
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPG-NARGNLAVNSLNNNTTPGQAVVVEMILTFQL 142          
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 3
Query:  351 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGT 656
            G+G LG+A AFG  +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILT 140          
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 3
Query:  351 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGT 656
            G+G LG+A AFG  +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILT 140          
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 3
Query:  351 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGT 656
            G+G LG+A AFG  +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILT 140          
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.264e-12
Identity = 48/151 (31.79%), Postives = 73/151 (48.34%), Query Frame = 3
Query:  213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665
            E+   +F++A+ AEF+A            + + S               IL I+ AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+ AQ +GAI+G G++  +      R     N L +  + G  +  E+I TF L
Sbjct:    4 EVCSLAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL-YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQL 142          
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 51/155 (32.90%), Postives = 76/155 (49.03%), Query Frame = 3
Query:  213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGL----AAEIIGTFVL 665
            E T+    +A +AEFI+            + +   T+        +G+    +A AFG  +FV V   A ISGGH+NPAVTFG F+   ++L+R ++Y +AQ LG++    ++K           GG    A G S GVG+      EI+ TF L
Sbjct:   13 EATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTP--SGLVAAAVAHAFG--LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFAT--------GGLAVPAFGLSAGVGVLNAFVFEIVMTFGL 155          
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 54/153 (35.29%), Postives = 73/153 (47.71%), Query Frame = 3
Query:  213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT--FVL 665
            EL   SF+RA+ AEF A            +G   +  P         + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ YMVAQ LGA++G  ++ +       R     N L  G S G     EI  T  FVL
Sbjct:    3 ELRSASFWRAICAEFFASLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATIVEIFLTLQFVL 143          
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 3
Query:  345 CAGVGI------LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665
            C GV I      + IA  FG +I  +V C   +SG HINPAVT GL +   +S+++A+ Y++ QC+GAI+G  ++K    + + R       LA G +  +G   E   TFVL
Sbjct:   47 CTGVQISEGDVVVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEF-RGTLCMTSLAPGVTPPMGFLVEACITFVL 158          
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = 3
Query:  228 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665
            + +R L+AEF+             +G+     P           +  IA+ FG ++  L      +SG HINPAVT GL +   +S+++   Y+V+QC+GAI+G  L+KA   S     G G   +    + G G+  E + TF+L
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPT----------MTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIG-GLGVTGIDPRLTAGQGVMIEALITFIL 155          
The following BLAST results are available for this feature:
BLAST of FC876233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
AQP5_SHEEP1.809e-1231.79Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_PIG1.809e-1233.11Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQPZ_BRUME4.031e-1242.59Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQPZ_BRUAB4.031e-1242.59Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA24.031e-1242.59Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
AQP5_RAT5.264e-1231.79Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
TIP11_ARATH6.875e-1232.90Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
MIP_BOVIN6.875e-1235.29Lens fiber major intrinsic protein OS=Bos taurus G... [more]
AQP_CICVR6.875e-1237.17Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP_AEDAE6.875e-1230.14Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]

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Properties
Property NameValue
Genbank descriptionC32002B03EF DevOvary1 Citrus clementina cDNA clone C32002B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876233 ID=FC876233; Name=FC876233; organism=Citrus clementina; type=EST; length=665bp
GATCCAAAACAACCAAAAAAAAAAAAAGAAAAAGAAAAAGGCTTCTCTCT
CGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTCTCTCCA
AATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTGGCAGAGC
ACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGAGCCGCTA
TTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCTTGATAGC
TGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTCTTGACTGTCA
TTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCTGTGCC
GGCGTCGGCATCCTCGGTATCGCCTGGGCCTTCGGTGGCATGATCTTTGT
CCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCCGGCAG
TGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTGCTGTG
ATGTACATGGTGGCGCAGTGCCTTGGTGCAATCTCCGGTGTTGGGTTGGT
CAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGCCAACG
AGCTGGCCGATGGGTACAGCACAGGCGTTGGATTGGCCGCCGAGATCATC
GGCACCTTTGTGTTG
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