FC876233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12 Identity = 36/109 (33.03%), Postives = 59/109 (54.13%), Query Frame = 3 Query: 351 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV-------KAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT 656 G+G+LG+A+AFG + + + ISG H+NPAV+FGL + + + Y++AQ +GAI G++ F+ S G A+ GY+ G G +E++ T Sbjct: 34 GIGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMT 142
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12 Identity = 47/151 (31.13%), Postives = 73/151 (48.34%), Query Frame = 3 Query: 213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 E+ +F++A+ AEF+A + + S IL I+ AFG I L +SGGHINPA+T L + ++SL+RA+ Y+ AQ +GAI+G G++ R N L++ + G + E+I TF L Sbjct: 4 EVCSVAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPG-NARGNLAVNALSNNTTPGKAVVVELILTFQL 142
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.980e-12 Identity = 53/146 (36.30%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 237 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGA---NELADGYSTGVGLAAEIIGTFVL 665 RA +AEFI+ I Y T A G++ IA G +FV V A ISGGH+NPAVTFGL + +++++ V Y +AQ LG+ + L+K Y T GG A + +A G + G+ EII TF L Sbjct: 19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDA----ALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLK-----YVT--GGLAVPTHSVAAGLGSIEGVVMEIIITFAL 153
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.980e-12 Identity = 53/153 (34.64%), Postives = 73/153 (47.71%), Query Frame = 3 Query: 213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT--FVL 665 EL SF+RA+ AEF A +G + P + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA+ YM AQ LGA++G ++ + + R N L G S G EI T FVL Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPA-AVRGNLALNTLHPGVSLGQATTVEIFLTLQFVL 143
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.980e-12 Identity = 50/148 (33.78%), Postives = 73/148 (49.32%), Query Frame = 3 Query: 213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT 656 EL SF+RA++AEF+ +G + P + G+LG A AFG LV +SGGHINPA+T LA ++SL RA+ Y++AQ LGA++G G++ + R G + L G G E++ T Sbjct: 3 ELRSSSFWRAILAEFLGSLLYTLLG----LGASLRWAPGPH-------GVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPA-AVRGTLGLSALHPSVGPGQGTVVELLLT 138
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11 Identity = 53/153 (34.64%), Postives = 73/153 (47.71%), Query Frame = 3 Query: 213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT--FVL 665 EL SF+RA+ AEF A +G + P + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA+ Y+VAQ LGA++G ++ + R N L G S G EI T FVL Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATIVEIFLTLQFVL 143
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.000e-11 Identity = 52/148 (35.14%), Postives = 69/148 (46.62%), Query Frame = 3 Query: 237 RALIAEFIAXXXXXXXXXXXXIGYKSQT-----DPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 +A +AEFI+ I Y T DPA G++ +A G +FV V A ISGGH+NPAVTFGL L +++++ V Y +AQ LGAI G LV+ +G G G+ EII TF L Sbjct: 20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPA---------GLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGL 152
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.613e-11 Identity = 53/153 (34.64%), Postives = 71/153 (46.41%), Query Frame = 3 Query: 213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT--FVL 665 EL SF+RA+ AEF A +G + P + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA YM AQ LGA++G ++ + R N L G S G EI T FVL Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATTVEIFLTLQFVL 143
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.613e-11 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 3 Query: 351 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYGGGANELAD----GYSTGVGLAAEIIGT 656 G+G+LG+++AFG + + Y GISGGH NPAV+ GL +A ++ V Y++AQ GAI+ + V A K+ + G AN + GYS L E++ T Sbjct: 33 GIGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMT 140
BLAST of FC876233 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11 Identity = 52/148 (35.14%), Postives = 67/148 (45.27%), Query Frame = 3 Query: 237 RALIAEFIAXXXXXXXXXXXXIGYKSQT-----DPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 665 +A +AEFIA I Y T DPA G++ IA A +FV V A ISGGH+NPAVTFGL + ++++ ++Y VAQ LGA V F Y T G S G+ EI+ TF L Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPA---------GLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGA-----SVACFLLQYVTHGQAIPTHGVSGISEIEGVVMEIVITFAL 152 The following BLAST results are available for this feature:
BLAST of FC876233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876233 ID=FC876233; Name=FC876233; organism=Citrus clementina; type=EST; length=665bpback to top |