FC876235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SYNS9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9902) GN=dxr PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 8.430e-46 Identity = 97/166 (58.43%), Postives = 122/166 (73.49%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK------PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K ISVLGSTGSIGTQTL IV + D+FRVVAL AG N+ LL +Q++R +P++VA+ +E+LL E+K+ L ++ PE++ G G+ AA A VVTGIVGCAGL PT+AA+ AGKD+ALANKETLIA GP VLP K ++LPADSEHSAIFQC+Q Sbjct: 2 KAISVLGSTGSIGTQTLQIVDDFPDQFRVVALTAGRNLALLVEQIQRHQPELVALADEALLPELKQRLEALDPSDRPAQCPEMVGGPDGLEVAASWGSAELVVTGIVGCAGLLPTLAAVRAGKDLALANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQ 167
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SYNSC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9605) GN=dxr PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 3.203e-45 Identity = 97/164 (59.15%), Postives = 119/164 (72.56%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV----EEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K ISVLGSTGSIGTQTL I E ++FRVVAL AG N+ LL +QV+R +P+VVA+ + LL E++E L + + P+++ G G+ AA A VVTGIVGCAGL PT+AAI AGKD+ALANKETLIA GP VLP K ++LPADSEHSAIFQC+Q Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPEQFRVVALTAGRNLKLLVEQVQRHRPEVVALADSDLLPELQERLKDAGVTGADAPQLVGGADGLNVAAAWDSADLVVTGIVGCAGLLPTLAAIRAGKDLALANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQ 165
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PROM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL1A) GN=dxr PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 4.184e-45 Identity = 95/166 (57.23%), Postives = 121/166 (72.89%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE------KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K ISVLGSTGSIGTQTL I E D+F++VAL AG N+ L+ Q++ +P+VV++ +ESLL E+ + ++ E KP ++AG +G+ AA A VVTGIVGCAGL PT+AAIEAGKD+ALANKETLIA GP V+P K ++LPADSEHSAIFQC+Q Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPDQFKIVALTAGKNLDLVTKQIETHQPEVVSLADESLLPELTRRINSLNEDSKILKKPLLMAGAEGLNTAAAWGSADLVVTGIVGCAGLLPTLAAIEAGKDLALANKETLIAAGPVVIPALKKSGSRLLPADSEHSAIFQCLQ 167
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SYNS3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9311) GN=dxr PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.217e-44 Identity = 96/166 (57.83%), Postives = 121/166 (72.89%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV------EEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K ISVLGSTGSIGTQTL IV + D+FRVVAL+AG N++LL Q++R +P VVA+ +++LL E+K+ L + E P ++ G +G+ A A VVTGIVGCAGL PT+AAI AGKD+A+ANKETLIA GP VLP K ++LPADSEHSAIFQC+Q Sbjct: 2 KAISVLGSTGSIGTQTLAIVEDFPDQFRVVALSAGRNLSLLVSQIQRHRPDVVALADQALLAELKDRLMALPADTRPEPLPHLVGGPEGLDVVASWDSADLVVTGIVGCAGLLPTLAAIRAGKDLAVANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQ 167
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PROMT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL2A) GN=dxr PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.217e-44 Identity = 94/166 (56.63%), Postives = 121/166 (72.89%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE------KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K ISVLGSTGSIGTQTL I E ++F++VAL AG N+ L+ Q++ +P+VV++ +ESLL E+ + ++ E KP ++AG +G+ AA A VVTGIVGCAGL PT+AAIEAGKD+ALANKETLIA GP V+P K ++LPADSEHSAIFQC+Q Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPEQFKIVALTAGKNLDLVIKQIETHQPEVVSLADESLLSELSSRINSLTENKKIVKKPLLMAGAEGLNTAAAWGSADLVVTGIVGCAGLLPTLAAIEAGKDLALANKETLIAAGPVVIPALKKSGSRLLPADSEHSAIFQCLQ 167
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PROMP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dxr PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 3.542e-44 Identity = 91/158 (57.59%), Postives = 119/158 (75.32%), Query Frame = 1 Query: 22 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN--VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 +LGSTGSIGTQTL+IV+E DKF+VVAL+AG NI LL +QV + KP+V+A+ +E+LL ++K + N + P +L G + + A A TV+TGIVGCAGL PT++AI+AGK+IALANKETLIA G V+P + ++LPADSEHSAIFQCIQ Sbjct: 1 MLGSTGSIGTQTLEIVSELPDKFKVVALSAGRNIDLLTEQVSQHKPEVIAIEDENLLTDLKNNINNLGISNPPIVLGGREAINSVAAWDSADTVITGIVGCAGLIPTMSAIKAGKNIALANKETLIAAGSVVIPALKESKSRLLPADSEHSAIFQCIQ 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PROM5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9515) GN=dxr PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 7.890e-44 Identity = 92/162 (56.79%), Postives = 121/162 (74.69%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN--VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I+VLGSTGSIGTQTL+IV E +KF+VVAL+AG NI LL +QV + KP+V+A+ +E+LL ++K + N + P +L G + + A A TV+TGIVGCAGL PT++AI+A K+IALANKETLIA G V+P ++ ++LPADSEHSAIFQCIQ Sbjct: 2 KYITVLGSTGSIGTQTLEIVRELPNKFKVVALSAGRNIDLLTEQVSQHKPEVIAIDDENLLTDLKNNINNLGISNPPIVLGGREAINSVAAWDSADTVITGIVGCAGLIPTMSAIKASKNIALANKETLIAAGSVVIPALKENKSRLLPADSEHSAIFQCIQ 163
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SYNPX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain WH8102) GN=dxr PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 2.296e-43 Identity = 91/159 (57.23%), Postives = 116/159 (72.96%), Query Frame = 1 Query: 22 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE---ALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 +LGSTGSIGTQTL I E ++FRVVAL AG N+ LL Q++R +P++VA+ N LL E+++ AL ++P+++ G G+ AA A VVTGIVGCAGL PT+AA+ AGKD+ALANKETLIA GP VLP K ++LPADSEHSAIFQC+Q Sbjct: 1 MLGSTGSIGTQTLQIAEEFPEQFRVVALTAGQNLDLLVQQIQRHQPELVALANADLLPELQQRLDALGTDRKRPQLVGGPDGLNIAASWESADLVVTGIVGCAGLLPTLAAVRAGKDLALANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQ 159
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PROMM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9313) GN=dxr PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 3.916e-43 Identity = 91/162 (56.17%), Postives = 121/162 (74.69%), Query Frame = 1 Query: 22 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK------PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 +LGSTGSIGTQTL+I E ++FRVVAL AG+N++L+ +Q++R P+VVA+ + SLL E+K+ L + + P++LAG +G+ AA A VV+GIVGCAGL PT+AAI+AGKD+ALANKETLIA P VLP + ++LPADSEHSAIFQC+Q Sbjct: 1 MLGSTGSIGTQTLEIAEEFPERFRVVALTAGTNVSLVVEQIQRHHPEVVALADASLLPELKQQLNALPSEQQPPHLPQLLAGPEGLNVAASWDSADLVVSGIVGCAGLLPTLAAIKAGKDLALANKETLIAAAPVVLPELKRSGSRLLPADSEHSAIFQCLQ 162
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_GEOUR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter uraniireducens (strain Rf4) GN=dxr PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.538e-42 Identity = 88/160 (55.00%), Postives = 113/160 (70.62%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K +++LGSTGSIG TLDIVA H DKF+VVAL AG N+ LL Q++ F PQ+VAV NE L ++++ L+ + P IL G +G+I AA DA VV IVG AGL PT AAI+AGKDIALANKETL+ G ++ + H +K+ P DSEHSA+FQ +Q Sbjct: 2 KKLAILGSTGSIGVSTLDIVAAHPDKFQVVALTAGGNLDLLKKQIEEFSPQLVAVLNEELAQKLQQMLSG--KGPAILHGVEGMIAAATAADADMVVAAIVGAAGLVPTAAAIKAGKDIALANKETLVTAGRLIMDMVKAHGVKLYPVDSEHSAVFQSLQ 159 The following BLAST results are available for this feature:
BLAST of FC876235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876235 ID=FC876235; Name=FC876235; organism=Citrus clementina; type=EST; length=489bpback to top |