FC876235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PROMA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus GN=dxr PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.645e-41 Identity = 90/162 (55.56%), Postives = 117/162 (72.22%), Query Frame = 1 Query: 22 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK------PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 +LGSTGSIGTQTL+I E ++F+VVAL AG N+ LL Q++ +P+VVA+ + +L E++E L ++ K P ++AG G+ AA A VVTGIVGCAGL PT+AAI+AGKDIALANKETLIA GP V+P + ++LPADSEHSAIFQC+Q Sbjct: 1 MLGSTGSIGTQTLEIAKECPEQFKVVALTAGRNLDLLIKQIQEHQPEVVALARKDILPELQERLNSLTGKERPNALPHLVAGNDGLNIAASWHSADLVVTGIVGCAGLLPTLAAIKAGKDIALANKETLIAAGPVVIPELKRSGSRLLPADSEHSAIFQCLQ 162
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CHLT3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=dxr PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 3.665e-41 Identity = 82/159 (51.57%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K I++LGSTGSIGT +L++++ ++F L+AGSN+ LLA+Q KRF+P+ V + NESL E++ LA E EI++GE+G+ E +R D V+ +VG AGLKPTV A++AGKD+ LANKETL+ GG + L +H K+LP DSEHSAIFQC+ Sbjct: 2 KRITILGSTGSIGTNSLEVISRFPEQFCATYLSAGSNVKLLAEQAKRFRPKGVVIMNESLEGELRSLLAG--ESIEIMSGEEGLCEISRRSDTDFVIGSVVGFAGLKPTVEALKAGKDVGLANKETLVVGGEIITSLVEEHGCKMLPVDSEHSAIFQCL 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_BREBN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dxr PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 6.252e-41 Identity = 83/160 (51.88%), Postives = 117/160 (73.12%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I++LGSTGS+GT TL++V +H + F VVA+AAG+NI LL QV+ FKP++V+V NE E+++ LA + +PEI+ G +G+ ARH A V+T +VG G+ PT+AAIEAGK I LANKETL++ GP V+ A + + I+P DSEHSA++QC+Q Sbjct: 2 KKIALLGSTGSVGTSTLEVVGQHPEDFSVVAMAAGTNIDLLTLQVETFKPELVSVGNEKAAVELRDRLAG-KSQPEIVYGAEGLELVARHEAANFVMTAVVGSVGVAPTLAAIEAGKTIGLANKETLVSAGPVVMKRAKEKGVSIIPVDSEHSAVYQCLQ 160
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_BACHD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus halodurans GN=dxr PE=3 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 5.292e-40 Identity = 85/161 (52.80%), Postives = 114/161 (70.81%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN-VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K ISVLG+TGSIGTQTLD++A H DKFR+VA++ G N+TL +Q+ +FKP +V+V + DE ++ LA+ V E ++ GE+G+IE A A +V ++G GL PT+AAIEA K IALANKETL+ G V A +H +K+LP DSEHSAIFQ +Q Sbjct: 2 KGISVLGATGSIGTQTLDVLANHRDKFRLVAMSVGKNLTLAEEQIHQFKPPLVSV----MTDEDRKTLASKVPEGTRVVCGEEGLIEVATAEKAEILVNAVIGSVGLAPTLAAIEAKKTIALANKETLVTAGHLVTEKAREHGVKLLPVDSEHSAIFQALQ 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_GEOSL (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter sulfurreducens GN=dxr PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 9.027e-40 Identity = 83/160 (51.88%), Postives = 112/160 (70.00%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I++LGSTGSIG TL++V+ H D+FRVVAL AG+N+ +L Q++ F+PQ+V+V +E L E+ +L KPEI G +G+I AA DA VV IVG AGL PT AAI AGKD+ALANKETL+ G ++ L N+++ P DSEHSA+FQ ++ Sbjct: 2 KNITILGSTGSIGVSTLEVVSAHPDRFRVVALTAGNNLEMLRQQIETFRPQMVSVLSEKLAVELDRSLPGY--KPEIHYGVEGLIAAATAGDAHMVVAAIVGAAGLVPTAAAIRAGKDVALANKETLVTAGRLIMDLVRDKNVRLYPVDSEHSAVFQSME 159
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CHLTE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium tepidum GN=dxr PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 9.027e-40 Identity = 84/159 (52.83%), Postives = 109/159 (68.55%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K +S+LGSTGSIG TLD+V H ++F + ALA G ++ +L Q+ F+P +V+VR+E+ + +K L + KPEIL G +G E A A VV+ IVG AGL PTV AIEAGKDIALANKETL+ G V L KH++K+LP DSEHSAIFQ + Sbjct: 2 KSLSILGSTGSIGLSTLDVVRRHPERFSIAALAEGHDVEMLLKQIDEFRPSLVSVRDEASRERLKGMLG--DHKPEILCGLEGAAEVAAVDGADMVVSAIVGAAGLVPTVRAIEAGKDIALANKETLVVAGQLVSDLVKKHDVKLLPVDSEHSAIFQSL 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_EUBE2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=dxr PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.179e-39 Identity = 84/159 (52.83%), Postives = 116/159 (72.96%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K +S+LGSTGSIGTQTLD++ + D VVALAAG+ ++ LA+QV+ FKPQ+V + E L+ E+K + +++ K I++G++G+IEAA A VVT +VG G+ PTV AI+A KDIALANKETL+ G ++ LA + N+ I P DSEHSAIFQC+ Sbjct: 2 KNVSILGSTGSIGTQTLDVIRRNAD-INVVALAAGTRVSDLAEQVREFKPQLVCIGKEELVPELKTLIGDMDVK--IVSGDEGLIEAATIESAEIVVTAVVGMMGITPTVEAIKAHKDIALANKETLVCAGHIIMSLAKECNVNIYPVDSEHSAIFQCL 157
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CHLPB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium phaeobacteroides (strain BS1) GN=dxr PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.430e-39 Identity = 83/159 (52.20%), Postives = 110/159 (69.18%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K +S+LGSTGSIG TLD+V +H +KF V LA G +I LLA+Q+K F+P +V+VR+++ ++E L + EKPEIL G +G + VV+ IVG AGL PTV+AI+AGKDIALANKETL+ G V L +H + +LP DSEHSAIFQ + Sbjct: 2 KSLSILGSTGSIGLSTLDVVRQHPEKFNVTGLAEGHDINLLAEQIKEFRPDIVSVRDKASAGLLREQLGS--EKPEILWGIEGAAAVGAAEGSEMVVSAIVGAAGLVPTVSAIKAGKDIALANKETLVVAGQLVSDLVKEHKVTLLPVDSEHSAIFQSL 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SYMTH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Symbiobacterium thermophilum GN=dxr PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 5.851e-39 Identity = 82/161 (50.93%), Postives = 111/161 (68.94%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV--EEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K I++LGSTGSIGTQ LD++ H +FRVVALAAG + LA+Q RF+P +++V + ++ L + +PEI G +G+I AA HP++ V+T +VG G++PT+AAIEAGKDIALANKETL+A G V A +K+LP DSEHSAIFQ + Sbjct: 3 KGIAILGSTGSIGTQALDVIDHHPGRFRVVALAAGRQVERLAEQALRFRPALLSVADADAAAALRALLLAEAGDYRPEIAWGREGLIRAATHPESGLVLTSVVGAMGVEPTLAAIEAGKDIALANKETLVAAGELVTAAAQARGVKLLPVDSEHSAIFQSL 163
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PROA2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dxr PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 5.851e-39 Identity = 80/159 (50.31%), Postives = 110/159 (69.18%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K +S+LGSTGSIG TLD+V +H D+F + LA G ++TLLA+Q++ FKP +V+VR+E+ ++++E + E PEI G +G + VV+ IVG AGL PTV AI+AGKDIALANKETL+ G V L +H +++LP DSEHSAIFQ + Sbjct: 2 KSLSILGSTGSIGLSTLDVVRQHPDRFTITGLAEGHDVTLLAEQIREFKPSIVSVRDEASANQLRELIG--ESGPEIRWGIEGAAVVGEADGSDMVVSAIVGAAGLVPTVRAIKAGKDIALANKETLVVAGQLVSELVREHKVQLLPVDSEHSAIFQSL 158 The following BLAST results are available for this feature:
BLAST of FC876235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876235 ID=FC876235; Name=FC876235; organism=Citrus clementina; type=EST; length=489bpback to top |