FC876235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_GEOSF (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter sp. (strain FRC-32) GN=dxr PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 9.981e-39 Identity = 82/160 (51.25%), Postives = 110/160 (68.75%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K +++LGSTGSIG TL+IVA H +KF+++AL AG NI LL +Q+ F PQ+VAV+NE L +++ L+ K ++ G +G+I AA D VV IVG AGL PT AAIEAGKDIALANKETL+ G ++ + +K+ P DSEHSA+FQ +Q Sbjct: 2 KNLTILGSTGSIGVSTLEIVAAHPEKFKIIALTAGENIDLLKEQIDAFAPQLVAVKNEELALKLEGMLSC--RKTAVMYGVEGMIAAATASDTNMVVAAIVGAAGLLPTSAAIEAGKDIALANKETLVTAGRLIMDMVKTRGVKLYPVDSEHSAVFQSLQ 159
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PELLD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelodictyon luteolum (strain DSM 273) GN=dxr PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.702e-38 Identity = 80/160 (50.00%), Postives = 109/160 (68.12%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 + +S+LGSTGSIG TLD+V +H D+F++V LA G ++ +LA+Q++ F P +V+VR+ + +K L + PEI G +G A + VV+ IVG AGL PTV AI+AGKDIALANKETL+ G V L KHN+++LP DSEHSAIFQ +Q Sbjct: 2 RALSILGSTGSIGLSTLDVVRQHPDRFKIVGLAEGHDVNMLAEQIREFNPSIVSVRDAGSAELLKTLLGT--DLPEICHGIEGAGTVAAAEGSDMVVSAIVGAAGLTPTVKAIKAGKDIALANKETLVVAGQLVSDLVKKHNVRLLPVDSEHSAIFQSLQ 159
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_BACCQ (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain Q1) GN=dxr PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.224e-38 Identity = 80/159 (50.31%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K IS+LG++GSIGTQTLD++ H D+FR+VA +AG NI ++ F PQ+V+V+ E D +K L V +++ G +G++E A HPDA VV +VG GL PT+ AIEA K I +ANKETL+ G V+ A KHN+ +LP DSEHSAIFQC+ Sbjct: 2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSAGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKVVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCL 156
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR2_BACCR (1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dxr2 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.224e-38 Identity = 80/159 (50.31%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K IS+LG++GSIGTQTLD++ H D+FR+VA + G NI ++ F PQ+V+V+ E D +K L +V +I+ G +G++E A HPDA VV +VG GL PT+ AIEA K I +ANKETL+ G V+ A KHN+ +LP DSEHSAIFQC+ Sbjct: 2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQSVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCL 156
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_GEOMG (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dxr PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.904e-38 Identity = 81/160 (50.62%), Postives = 113/160 (70.62%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K +++LGSTGSIGT TL+IVA H D+F+V+AL AGSN+ LL QV+ F+P++V+V L ++ L+ + KPEI G G+I AA +A VV IVG AGL PT AAI+AGKD+ALANKETL+ G ++ L ++ +++ P DSEHSA+FQ ++ Sbjct: 2 KKLTILGSTGSIGTSTLEIVAAHPDRFQVIALTAGSNLELLKQQVEVFRPRLVSVLTADLARQLDRMLS--DPKPEIHHGIPGLIAAATAGEADVVVAAIVGAAGLVPTAAAIKAGKDVALANKETLVTAGRIMMDLVRENGVRLYPVDSEHSAVFQSLE 159
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_GEOLS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=dxr PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.904e-38 Identity = 81/160 (50.62%), Postives = 109/160 (68.12%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I++LGSTGSIG TL+IVA H DKFRV++L+ N+ LLA Q+++F+P++ AV + + + +KE L+ VE E+ G +G+ AA P VV IVG AGL PT AAI AG D+ALANKETL+ G + L +H +K+ P DSEHSAIFQ I+ Sbjct: 2 KQIAILGSTGSIGVSTLEIVAAHPDKFRVLSLSGAKNLDLLARQIRQFRPRLAAVADPADIPRLKELLSGVEV--ELTGGVEGLCAAATAPGVQMVVAAIVGAAGLVPTAAAIRAGIDVALANKETLVTAGHLFMELVERHKVKLYPVDSEHSAIFQSIE 159
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_GEOSW (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacillus sp. (strain WCH70) GN=dxr PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 3.793e-38 Identity = 79/160 (49.38%), Postives = 109/160 (68.12%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K IS+LG++GSIGTQTLDI+ H D+F++ A++ G N+ + ++ F P++VAV ++++ A K +I+ GE+G+IEAA P+ VVT +VG GL PT+ AIEAGK IALANKETL+ G V A KH + +LP DSEHSAIFQC+Q Sbjct: 2 KYISILGASGSIGTQTLDIIRSHPDEFQLTAISIGKNVDMARAIIEEFAPRLVAVAEADAYEKLRSEYAG---KVKIVFGEEGLIEAAAFPETDIVVTAVVGSVGLVPTLRAIEAGKTIALANKETLVTAGHIVTAAAKKHGVSLLPVDSEHSAIFQCLQ 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CHLL2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dxr PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 3.793e-38 Identity = 81/159 (50.94%), Postives = 107/159 (67.30%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K +S+LGSTGSIG TLD+V +H KF + LA G ++ LL +Q+ F+P VV+VR+ + D++++ L KPEI G +G A A VV+ IVG AGL PTV+AI+AGK IALANKETL+ G V L KHN+++LP DSEHSAIFQ + Sbjct: 2 KALSILGSTGSIGLSTLDVVRQHPGKFTITGLAEGHDVGLLNEQINEFRPDVVSVRDAASADQLRKLLGT--HKPEIFYGIEGAATVAAAEGAEMVVSAIVGAAGLVPTVSAIKAGKHIALANKETLVVAGQLVSDLVKKHNVQLLPVDSEHSAIFQSL 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_BACC7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain AH187) GN=dxr PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 4.953e-38 Identity = 80/159 (50.31%), Postives = 107/159 (67.30%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K IS+LG++GSIGTQTLD++ H D+FR+VA + G NI ++ F PQ+V+V+ E D +K L V +I+ G +G++E A HPDA VV +VG GL PT+ AIEA K I +ANKETL+ G V+ A KHN+ +LP DSEHSAIFQC+ Sbjct: 2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCL 156
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_BACC3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain 03BB102) GN=dxr PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 4.953e-38 Identity = 80/159 (50.31%), Postives = 107/159 (67.30%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K IS+LG++GSIGTQTLD++ H D+FR+VA + G NI ++ F PQ+V+V+ E D +K L V +I+ G +G++E A HPDA VV +VG GL PT+ AIEA K I +ANKETL+ G V+ A KHN+ +LP DSEHSAIFQC+ Sbjct: 2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCL 156 The following BLAST results are available for this feature:
BLAST of FC876235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876235 ID=FC876235; Name=FC876235; organism=Citrus clementina; type=EST; length=489bpback to top |