FC876235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_HELMI (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dxr PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 7.153e-37 Identity = 81/160 (50.62%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I++LGSTGSIG QTL++V E + V ALAAGSN L Q++ ++P++ A+ + + EAL ++ GE G+ EAA P+ TVVT + G GL PT+AAIEAGK+IALANKETL+A GP V+ A + + ILP DSEHSAIFQC+Q Sbjct: 3 KRIAILGSTGSIGRQTLEVVDRSEGRLTVQALAAGSNWKELLAQIEIYRPRLAAMMETEAAERLAEALWERGLPIPVVTGEAGLAEAACLPEVDTVVTAVSGAIGLGPTMAAIEAGKEIALANKETLVAAGPLVMAAARRREVTILPVDSEHSAIFQCLQ 162
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CLOD6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium difficile (strain 630) GN=dxr PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 9.342e-37 Identity = 82/160 (51.25%), Postives = 111/160 (69.38%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA-NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K IS+LGSTGSIG QTLD+V ++ DKF +VA++A SNI LL +Q+ FKP+ V V E+ ++KE L N+E E+LAG +G+ + + ++T +VG GL PT+ AI+ G DIALANKETL+ G V+ A K+N+ ILP DSEHSAIFQC+ Sbjct: 2 KKISILGSTGSIGKQTLDVVRDNRDKFEIVAISANSNIELLLEQIVEFKPKYVTVFEENKALKLKEMLPKNIEI--EVLAGMEGLKIISSLDEVDVLLTAVVGMIGLVPTLCAIKKGIDIALANKETLVTAGELVMKEAEKYNVNILPVDSEHSAIFQCL 159
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PELPB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dxr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.220e-36 Identity = 78/159 (49.06%), Postives = 106/159 (66.67%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 + +++LGSTGSIG TLD+V +H +KF++ LA G ++ LLA+Q+K F P V+VR+ + +++ L + KPEI G +G A VV+ IVG AGL PTV+AI+AGK IALANKETL+ G V L KHN+ +LP DSEHSAIFQ + Sbjct: 2 RSLAILGSTGSIGLSTLDVVRQHPEKFKIAGLAEGHDVALLAEQIKEFLPAAVSVRDADSVKKLQTLLGS--HKPEIFHGLEGAAAIASAEGVDMVVSAIVGAAGLLPTVSAIKAGKHIALANKETLVVAGKLVSDLVKKHNVHLLPVDSEHSAIFQSL 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_EXIS2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dxr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.220e-36 Identity = 74/159 (46.54%), Postives = 109/159 (68.55%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K +S++G TGSIGTQTLD++A + D+F++V+ A G NI + + R +P++VAV +E++ ++++ L + P +L GE G+I A A V+T +VG GL+PT+AAIEAGK I LANKETL+ G V+ A + + ILP DSEH+AIFQC+ Sbjct: 2 KQVSIIGGTGSIGTQTLDVIAANPDRFQLVSFAFGKNIEVALPWLNRLRPELVAVLDETVKEQLEAVL---DYSPTVLVGEDGLIAVATADQADIVITAVVGAVGLRPTLAAIEAGKSIGLANKETLVTAGHLVMKKAREKGVAILPVDSEHAAIFQCL 157
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_EUBR3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=dxr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.220e-36 Identity = 81/160 (50.62%), Postives = 112/160 (70.00%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K IS+LGSTGSIGTQTLD++ EH D +VVAL+ G N++L+ Q + FKPQ V+V +E+ +++ +LA+ + E+ G G+I A VVT IVG G++PT+AAI+A K IALANKETL+ G ++PLA ++ + ILP DSEHSAIFQ +Q Sbjct: 2 KKISILGSTGSIGTQTLDVIREHGD-MQVVALSCGRNLSLIEKQAREFKPQFVSVSDENDAKKLRTSLADTDI--EVGYGMDGLIRCATIEPCDIVVTAIVGMLGIRPTIAAIKAKKTIALANKETLVTAGHIIIPLAKEYGVSILPVDSEHSAIFQSLQ 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_THEPX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermoanaerobacter sp. (strain X514) GN=dxr PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.593e-36 Identity = 77/160 (48.12%), Postives = 110/160 (68.75%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K + +LGSTGSIGTQTLD++ + F +V L A +N+ LL+ Q++ F P+VVAV++E ++++E N+++ EIL G +G+ E ++ DA VV + G AGL PTV AI+ GKDIALANKE L+ G V+ L K +I +LP DSEHSAI QC++ Sbjct: 2 KKVIILGSTGSIGTQTLDVIKNFRENFEIVGLTAYNNVELLSKQIREFNPKVVAVKDEDKANQLRE---NLKKNVEILTGSKGLQEIVKY-DADLVVVAVEGIAGLIPTVTAIQMGKDIALANKEVLVTAGQIVMDLVKKKDISLLPVDSEHSAILQCLR 157
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_GEOSM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter sp. (strain M21) GN=dxr PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.593e-36 Identity = 77/157 (49.04%), Postives = 105/157 (66.88%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQ 480 K +++LGSTGSIG TLD+VA + D FRVVAL AG+N+ LL Q++ F+P++V+V + +L +KPEI+ G +G+I AA + VV IVG AGL PT AAI AGKD+ALANKETL+ G V+ + + +K+ P DSEH A+FQ Sbjct: 2 KNLTILGSTGSIGVSTLDVVAAYPDMFRVVALTAGNNLELLKTQIETFRPELVSVLTAEKAQALSRSLTG--KKPEIMHGVEGMIAAATASETTMVVAAIVGAAGLVPTTAAIMAGKDVALANKETLVTAGHLVMQMVREKKVKLYPVDSEHCAVFQ 156
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CHLPD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=dxr PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.593e-36 Identity = 76/159 (47.80%), Postives = 106/159 (66.67%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 + +S+LGSTGSIG TLD+V +H ++F + LA G ++ +L Q++ F P++V+VRN E+ L N EKPEI G +G A A VV+ IVG AGL PT++AI+AGK+IALANKET++ G V LA +H + I+P DSEHSAI+Q + Sbjct: 2 RSLSILGSTGSIGLSTLDVVRQHPEQFTITGLAEGHDVGMLVKQIREFNPRLVSVRNADAAAELASLLGN--EKPEIFYGIEGAATVAAADGADMVVSAIVGAAGLVPTISAIKAGKNIALANKETMVVAGRLVTDLARQHKVTIIPVDSEHSAIYQSL 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_THEP3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=dxr PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.081e-36 Identity = 77/160 (48.12%), Postives = 110/160 (68.75%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K + +LGSTGSIGTQTLD++ + F +V L A +N+ LL+ Q++ F P+VVAV++E ++++E N+++ EIL G +G+ E ++ DA VV + G AGL PTV AI+ GKDIALANKE L+ G V+ L K +I +LP DSEHSAI QC++ Sbjct: 2 KKVIILGSTGSIGTQTLDVIKNFRENFEIVGLTAYNNVELLSKQIREFNPKVVAVKDEDKANQLRE---NLKKNVEILTGSKGLQEIVKY-DADLVVVAVEGIAGLIPTVTAIQRGKDIALANKEVLVTAGQIVMDLVKKKDITLLPVDSEHSAILQCLR 157
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR1_BACHK (1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 OS=Bacillus thuringiensis subsp. konkukian GN=dxr1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.081e-36 Identity = 74/159 (46.54%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K IS+LGSTGSIGT LD+V+ H + F++V L A NI LL Q+K F+P++V+V + L D ++ + +I G G+I A HP++ V++ +VG +GL PT+ A++A KDIA+ANKETL+A G V LA ++ +++P DSEHSAIFQC+ Sbjct: 3 KYISILGSTGSIGTSALDVVSAHPEHFKIVGLTANYNIELLEQQIKTFQPRIVSVATKELADTLR---TRISTNTKITYGTDGLIAVATHPNSNLVLSSVVGVSGLLPTIEALKAKKDIAIANKETLVAAGHIVTELAKQNGCRLIPVDSEHSAIFQCL 158 The following BLAST results are available for this feature:
BLAST of FC876235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876235 ID=FC876235; Name=FC876235; organism=Citrus clementina; type=EST; length=489bpback to top |