FC876235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR1_BACAN (1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 OS=Bacillus anthracis GN=dxr1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.081e-36 Identity = 74/159 (46.54%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K IS+LGSTGSIGT LD+V+ H + F++V L A NI LL Q+K F+P++V+V + L D ++ + +I G G+I A HP++ V++ +VG +GL PT+ A++A KDIA+ANKETL+A G V LA ++ +++P DSEHSAIFQC+ Sbjct: 3 KYISILGSTGSIGTSALDVVSAHPEHFKIVGLTANYNIELLEQQIKTFQPRIVSVATKELADTLR---TRISTNTKITYGTDGLIAVATHPNSNLVLSSVVGVSGLLPTIEALKAKKDIAIANKETLVAAGHIVTELAKQNGCRLIPVDSEHSAIFQCL 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_DESHD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dxr PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 4.636e-36 Identity = 77/160 (48.12%), Postives = 111/160 (69.38%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K +++LGSTGSIGTQTLDIV ++ ++ V ALAAG N+ + Q + FKPQ++ + E E+K+ +A+++ E+++G +G++ TVVT I G GL+PT+ A++AGKDIALANKETL+AGG V+ A + ILP DSEHSAIFQC++ Sbjct: 2 KRLTILGSTGSIGTQTLDIVRQNPEQLEVFALAAGKNVQEIELQAREFKPQIIGLMEEKAARELKQRVADLDI--EVVSGMEGLLRTVTDEVPDTVVTAISGRIGLEPTMEALKAGKDIALANKETLVAGGDLVMGTAQRLGRTILPVDSEHSAIFQCLE 159
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PELTS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=dxr PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.055e-36 Identity = 76/159 (47.80%), Postives = 107/159 (67.30%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K I ++GSTGSIG QTL+++ D+F+VV L +G N L+A+Q++ F+P VA+ E + +KE LA PE+ G G+ A P+A VV + G AG+ PT+AAI+AGKD+ALANKETL+A G V+ +A +H ILP DSEHSA++QC+ Sbjct: 2 KNIVLIGSTGSIGRQTLEVIGSLPDRFKVVGLGSGKNWRLMAEQIRVFRPSAVAMAGEREIMNLKELLAG-SYCPELGWGRTGMESLASMPEADLVVVAVTGFAGIYPTIAAIQAGKDVALANKETLVAAGHLVMKMAERHRAAILPVDSEHSAVWQCL 159
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_DESPS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulfotalea psychrophila GN=dxr PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.033e-35 Identity = 79/159 (49.69%), Postives = 105/159 (66.04%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K IS+LG+TGSIGT L++V + D++R+VA+AAG NI L A Q++ F P +V+V +E ++E L K IL G G E A +P A ++ IVG AGL PT+AAIEAGKDI LANKETL+ G V+ A + + +LP DSEHSAIFQ + Sbjct: 2 KKISLLGATGSIGTSVLEVVRKFSDQYRIVAMAAGRNIDLFARQIEEFSPDLVSVLDEEYAHCLQERLGGFRGK--ILWGNAGNEEVAAYPSASITISAIVGAAGLLPTLAAIEAGKDIGLANKETLVMAGKIVMERARRKGVALLPVDSEHSAIFQAL 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PHOLL (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Photorhabdus luminescens subsp. laumondii GN=dxr PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.349e-35 Identity = 77/159 (48.43%), Postives = 104/159 (65.41%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K +++LGSTGS+G TL +V + DKF+V ALAAG NI ++A+Q F+PQ A+ +E E+++ L K E+ GEQ + A D V++GIVG AGL PT+AAI AGK I LANKE+LI G F + KHN ++LP DSEH+AIFQ + Sbjct: 2 KRLTILGSTGSVGKSTLTVVRNNPDKFKVTALAAGKNIQVMAEQCLEFRPQYAAMADEVSAKELRQLLIEQGCKTEVFFGEQAACDLAALNDVDQVMSGIVGVAGLLPTLAAIRAGKQILLANKESLITSGRFFMDAVAKHNAQLLPIDSEHNAIFQSL 160
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_GEOKA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacillus kaustophilus GN=dxr PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.349e-35 Identity = 79/160 (49.38%), Postives = 102/160 (63.75%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K IS+LG++GSIGTQTLD++ H D+FR+ A + G NI + F P +VAV + D K + I+ GE+G+IEAA P A VVT +VG GL PT+ AIEAGK IALANKETL+ G V+ A + + +LP DSEHSAIFQC+Q Sbjct: 2 KYISILGASGSIGTQTLDVIRAHPDEFRLAAASVGKNIEAARRLIAEFSPSLVAVADR---DAYKVLYREYRGRTTIVYGEEGLIEAAVCPQADVVVTAVVGSVGLVPTLKAIEAGKAIALANKETLVVAGHLVMAAAKRRGVPLLPVDSEHSAIFQCLQ 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CHLCH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium chlorochromatii (strain CaD3) GN=dxr PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.349e-35 Identity = 78/159 (49.06%), Postives = 103/159 (64.78%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 + +S+LGSTGSIG TLD+V +H D+F +V LA G ++ LA Q++ FKP V+VR+ +++E L KPE+ G G A VV+ IVG AGL+PTVAAI+AGK IALANKETL+ G V L +H + +LP DSEHSAIFQ + Sbjct: 2 RALSILGSTGSIGLSTLDVVRQHRDRFTIVGLAEGHDVAALAAQIEEFKPLAVSVRDAESAKKLQELLG--AHKPEVYYGLDGAATIAALDGVDMVVSAIVGAAGLRPTVAAIKAGKHIALANKETLVVAGELVSRLVAEHKVHLLPVDSEHSAIFQSL 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CLOPE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium perfringens GN=dxr PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.762e-35 Identity = 76/160 (47.50%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K IS+LG TGSIGTQTLD++ H++ F +V + A NI L D +K F P+ VA+ +E ++ + + + K E++ G +G+++ A + VVT +VG GLKPTV AI GKDIALANKETL+ G V+ A ++ +KILP DSEHSAIFQ +Q Sbjct: 2 KRISILGVTGSIGTQTLDVLRFHKEDFELVGITANRNIELTLDIIKEFSPKYVAINHEESYKKLVDLVKSEGLKCEVIYGMEGLVKVATLDEIDIVVTSVVGMIGLKPTVEAIRKGKDIALANKETLVVAGELVMREAKENGVKILPVDSEHSAIFQSLQ 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CLOP1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=dxr PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.762e-35 Identity = 76/160 (47.50%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K IS+LG TGSIGTQTLD++ H++ F +V + A NI L D +K F P+ VA+ +E ++ + + + K E++ G +G+++ A + VVT +VG GLKPTV AI GKDIALANKETL+ G V+ A ++ +KILP DSEHSAIFQ +Q Sbjct: 2 KRISILGVTGSIGTQTLDVLRFHKEDFELVGITANRNIELTMDIIKEFSPKYVAINHEESYKKLVDLVKSQGLKCEVIYGMEGLVKVATLDEIDIVVTSVVGMIGLKPTVEAIRKGKDIALANKETLVVAGELVMREAKENGVKILPVDSEHSAIFQSLQ 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_DESRM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulfotomaculum reducens (strain MI-1) GN=dxr PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.005e-35 Identity = 80/159 (50.31%), Postives = 107/159 (67.30%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K IS+LGSTGSIG QTL++V ++ VVALAAG N L +Q K +KP +V+++ E +KE L + +PEI G G++ A +AV VVT + G GL PT AAI+A K IALANKETL+A G +V LA ++ ++ILP DSEHSAI+QC+ Sbjct: 3 KQISILGSTGSIGRQTLEVVNSFPEELNVVALAAGRNRELFLEQCKAYKPLLVSLQLEEDALWLKEHLIKEKLRPEIRYGLDGLVAVATCHEAVVVVTALSGAIGLVPTCAAIKASKKIALANKETLVAAGQYVTKLAEEYKVEILPVDSEHSAIWQCL 161 The following BLAST results are available for this feature:
BLAST of FC876235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876235 ID=FC876235; Name=FC876235; organism=Citrus clementina; type=EST; length=489bpback to top |