FC876235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_STRCO (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Streptomyces coelicolor GN=dxr PE=3 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 3.925e-35 Identity = 84/167 (50.30%), Postives = 110/167 (65.87%), Query Frame = 1 Query: 1 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA----NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 DGPK + VLGSTGSIGTQ +D+V + D+FRV AL+A G + LLA+Q R K + VAV E ++ ++EAL E PEILAG + + A D TV+ GI G GL PT+AA+EAG+ +ALANKE+LI GGP V LA +I+P DSEH+A+FQ + Sbjct: 21 DGPKDVVVLGSTGSIGTQAIDLVLRNPDRFRVTALSANGGRVALLAEQAYRLKARTVAVAREDVVPALREALTAQYGTGEPLPEILAGPEAATQLAAS-DCHTVLNGITGSIGLAPTLAALEAGRTLALANKESLIVGGPLVKALAKPG--QIIPVDSEHAALFQAL 184
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SACD2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dxr PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.925e-35 Identity = 75/157 (47.77%), Postives = 103/157 (65.61%), Query Frame = 1 Query: 16 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 I VLGSTGSIG TLD++A H DKF V AL A S+I LL +Q +F PQ +R+E+L +K+ + ++ E+LAGEQ + + A +V+ IVG AGL PT+AA+EAGK + LANKE+L+ G + A + +LP DSEH+AIFQC+ Sbjct: 4 ICVLGSTGSIGISTLDVLASHPDKFSVYALTANSSIDLLVEQCLKFSPQYAVIRDEALYLPLKQRIESLNCTTEVLAGEQALCDVASAVQVDSVMAAIVGAAGLAPTLAAVEAGKRVLLANKESLVMSGKLFMQAAKAASALVLPIDSEHNAIFQCL 160
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_DESHY (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulfitobacterium hafniense (strain Y51) GN=dxr PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.925e-35 Identity = 75/160 (46.88%), Postives = 110/160 (68.75%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K +++LGSTGSIGTQTLDIV ++ ++ V ALAAG N+ + Q + FKP+++ + E E+K+ +A+++ E+++G +G++ TVVT I G GL+PT+ A++ GKDIALANKETL+AGG V+ A + ILP DSEHSAIFQC++ Sbjct: 2 KRLTILGSTGSIGTQTLDIVRQNPEQLEVFALAAGKNVQEIELQAREFKPRIIGLMEEKAARELKQRVADLDI--EVVSGMEGLLRTVTDEVPDTVVTAISGRIGLEPTMEALKVGKDIALANKETLVAGGDLVMGTAQRLGRTILPVDSEHSAIFQCLE 159
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_GEOBB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=dxr PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 6.695e-35 Identity = 75/157 (47.77%), Postives = 101/157 (64.33%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQ 480 K +++LGSTGSIG TLD+V + D FRVVAL AG+N+ LL Q++ F P +V+V + +L +KPEI+ G +G+I AA + VV IVG AGL PT AAI AGKD+ALANKETL+ G V+ + + + + P DSEH A+FQ Sbjct: 2 KNLTILGSTGSIGVSTLDVVKAYPDMFRVVALTAGNNLELLKTQIETFSPDLVSVLTAEKAQALSRSLTG--KKPEIMHGVEGMIAAATASETTMVVAAIVGAAGLVPTTAAIMAGKDVALANKETLVTAGHLVMQMVREKKVNLYPVDSEHCAVFQ 156
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PROMH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Proteus mirabilis (strain HI4320) GN=dxr PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 76/159 (47.80%), Postives = 103/159 (64.78%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K I++LGSTGSIGT TL ++ + D+F+V+AL AG N T +A Q + F+P+ + +E E+K+ LAN K EIL+G V E A +A V++ I G AGLKPT+AAIE GK I LANKE+LI G K+ K+LP DSEH+AI+Q + Sbjct: 2 KQITILGSTGSIGTSTLSVIENNPDEFQVLALVAGKNATKMAQQCRAFQPKYAVMSDEKSAGELKQLLANTSCKTEILSGSDAVNEIAALDEADQVMSAITGVAGLKPTLAAIEKGKRILLANKESLITSGRLFFDAVAKYGAKVLPIDSEHNAIYQSL 160
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CLOB6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=dxr PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.491e-34 Identity = 69/160 (43.12%), Postives = 108/160 (67.50%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I++LG+TGSIGTQTLD++ + +++ ++VA++A + + + +K FKP+ + E+ +++ N + ++L G +G+I + + TVVT +VG GL PT+ AIE+GKDIALANKETL+ G V+ A +HN+ ILP DSEH AIFQC++ Sbjct: 2 KNITILGATGSIGTQTLDVIRKEKEELKLVAISANKSYKKVIEIIKEFKPKYAVLMEENAFKIVEDFCVNSKIDTKVLKGMEGMIYISTLEEINTVVTSVVGMIGLVPTIKAIESGKDIALANKETLVVAGELVISKAKEHNVNILPVDSEHGAIFQCLR 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CLOK5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dxr PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.948e-34 Identity = 76/160 (47.50%), Postives = 102/160 (63.75%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K IS+LG TGSIGTQ LDI+ + E+ F++VA+++ S++ L D V F P + + + K+ +N +IL G G+ PD V+T +VG GL PT+ AIE+GKDIALANKETL+ GG V LA K+ +KI P DSEHSAIFQCI+ Sbjct: 2 KKISILGVTGSIGTQALDILRKDEENFKLVAVSSHSSVNKLLDIVDEFNPSYAVLTERNAYLKFKDHCSNKNLDTKILFGIDGLNTIVALPDIDMVLTSVVGMVGLVPTIKAIESGKDIALANKETLVVGGELVTKLAKKNKVKIFPVDSEHSAIFQCIK 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CLOK1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium kluyveri (strain NBRC 12016) GN=dxr PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.948e-34 Identity = 76/160 (47.50%), Postives = 102/160 (63.75%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K IS+LG TGSIGTQ LDI+ + E+ F++VA+++ S++ L D V F P + + + K+ +N +IL G G+ PD V+T +VG GL PT+ AIE+GKDIALANKETL+ GG V LA K+ +KI P DSEHSAIFQCI+ Sbjct: 2 KKISILGVTGSIGTQALDILRKDEENFKLVAVSSHSSVNKLLDIVDEFNPSYAVLTERNAYLKFKDHCSNKNLDTKILFGIDGLNTIVALPDIDMVLTSVVGMVGLVPTIKAIESGKDIALANKETLVVGGELVTKLAKKNKVKIFPVDSEHSAIFQCIK 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_BACV8 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=dxr PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.948e-34 Identity = 72/160 (45.00%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I++LGSTGSIGTQ L ++ EH D + V AL A + + LL +Q ++F P+ V + NE ++KEAL+++ K + AG + + V+ +VG AGL+PT+ AI+AGK IALANKETL+ G + LA++++ +LP DSEHSAIFQC++ Sbjct: 3 KQIAILGSTGSIGTQALQVIEEHPDLYEVYALTANNRVDLLVEQARKFMPEAVVIANEEKYLQLKEALSDLPVK--VYAGADALSQIVESQPIDIVLASMVGYAGLRPTINAIKAGKAIALANKETLVVAGELINALANQYHTPVLPVDSEHSAIFQCLE 160
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_THETN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermoanaerobacter tengcongensis GN=dxr PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 4.339e-34 Identity = 74/160 (46.25%), Postives = 111/160 (69.38%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K + +LGSTGSIG QTLD+V +++F +V L +N++LL+ Q+K F+P+VVAV++E +++E N++E E+L G++G+ E ++ +A VV + G AGL PTV AI+ GK+IALANKE L+ G V+ L + I+ LP DSEHSAI QC++ Sbjct: 2 KKLIILGSTGSIGRQTLDVVRSLKEEFEIVGLTGYNNVSLLSKQIKEFRPKVVAVKDEEKARKLRE---NLDEPIEVLTGKEGLKEIVKY-EADMVVVAVEGIAGLIPTVEAIKLGKNIALANKEVLVTAGEIVMGLVKEKKIEFLPVDSEHSAILQCLK 157 The following BLAST results are available for this feature:
BLAST of FC876235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876235 ID=FC876235; Name=FC876235; organism=Citrus clementina; type=EST; length=489bpback to top |