FC876238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_BRANA (Malate dehydrogenase, mitochondrial OS=Brassica napus GN=MDH PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 6.695e-35 Identity = 70/102 (68.63%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 184 AKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 + G P KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV AD+ H++T + V G++G L AL G D+VIIPAGVPRKPGMTRDDLFNINAG Sbjct: 23 SSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAG 124
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 6.695e-35 Identity = 70/102 (68.63%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 184 AKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 + G P KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV AD+ H++T + V G++G L AL G D+VIIPAGVPRKPGMTRDDLFNINAG Sbjct: 23 SSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSEVVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAG 124
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_CITLA (Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 70/97 (72.16%), Postives = 82/97 (84.54%), Query Frame = 1 Query: 199 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 P KVAVLGAAGGIGQPLA+LMK+NPLVS L LYD+ TPGV AD+ H++T + V G++G++QL AL G D+VIIPAGVPRKPGMTRDDLFNINAG Sbjct: 33 PERKVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRSEVTGYVGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAG 129
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM2_ARATH (Malate dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=At3g15020 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 9.667e-34 Identity = 67/97 (69.07%), Postives = 79/97 (81.44%), Query Frame = 1 Query: 199 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 P KV +LGAAGGIGQPL++LMK+NPLVS L LYD+ NTPGV AD+ H++T + V G++G L AL G D+VIIPAGVPRKPGMTRDDLFNINAG Sbjct: 28 PDRKVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVSGYMGDDDLGKALEGADLVIIPAGVPRKPGMTRDDLFNINAG 124
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_MACFA (Malate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=MDH2 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.813e-33 Identity = 66/93 (70.97%), Postives = 81/93 (87.10%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINA 486 KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T AVV+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAVVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNA 118
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_PONAB (Malate dehydrogenase, mitochondrial OS=Pongo abelii GN=MDH2 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.184e-33 Identity = 65/93 (69.89%), Postives = 80/93 (86.02%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINA 486 KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNA 118
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_PIG (Malate dehydrogenase, mitochondrial OS=Sus scrofa GN=MDH2 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 8.184e-33 Identity = 65/93 (69.89%), Postives = 80/93 (86.02%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINA 486 KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNA 118
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_HUMAN (Malate dehydrogenase, mitochondrial OS=Homo sapiens GN=MDH2 PE=1 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 8.184e-33 Identity = 65/93 (69.89%), Postives = 80/93 (86.02%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINA 486 KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNA 118
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_BOVIN (Malate dehydrogenase, mitochondrial OS=Bos taurus GN=MDH2 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.184e-33 Identity = 65/93 (69.89%), Postives = 80/93 (86.02%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINA 486 KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNA 118
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_RAT (Malate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Mdh2 PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 1.823e-32 Identity = 65/93 (69.89%), Postives = 80/93 (86.02%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINA 486 KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNA 118 The following BLAST results are available for this feature:
BLAST of FC876238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876238 ID=FC876238; Name=FC876238; organism=Citrus clementina; type=EST; length=491bpback to top |