FC876238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_MOUSE (Malate dehydrogenase, mitochondrial OS=Mus musculus GN=Mdh2 PE=1 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 1.823e-32 Identity = 65/93 (69.89%), Postives = 80/93 (86.02%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINA 486 KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNA 118
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_CAEEL (Probable malate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=mdh-1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.543e-31 Identity = 70/119 (58.82%), Postives = 87/119 (73.11%), Query Frame = 1 Query: 133 TLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 TL +SGL + R +P KVA+LGAAGGIGQPL +L+K +PLV+ L LYDVVNTPGV AD+SH+D+NA V G ++L A+ D+++IPAGVPRKPGMTRDDLFN NAG Sbjct: 7 TLVQAAANSGLRAVSVRHSSQAP--KVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAADLSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAG 123
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHP_ARATH (Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At3g47520 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.016e-31 Identity = 63/94 (67.02%), Postives = 78/94 (82.98%), Query Frame = 1 Query: 205 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINA 486 +KVAVLGAAGGIGQPL++L+K++PLVS LHLYD+ N GV AD+SH +T + VR F G +L D L +++V+IPAGVPRKPGMTRDDLFNINA Sbjct: 83 YKVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTGPSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINA 176
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_CHLRE (Malate dehydrogenase, mitochondrial OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.438e-31 Identity = 69/102 (67.65%), Postives = 79/102 (77.45%), Query Frame = 1 Query: 184 AKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 A G KVAVLGAAGGIGQPL+MLMK+N VS L LYD+ TPGV AD+SH++T A V+GF + L +AL G D+VIIPAGVPRKPGMTRDDLF INAG Sbjct: 56 APSSGKGRKVAVLGAAGGIGQPLSMLMKMNSQVSSLSLYDIAGTPGVAADVSHINTKAQVKGF-DKDGLAEALRGCDLVIIPAGVPRKPGMTRDDLFKINAG 156
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_SCHPO (Malate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=MDH1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.145e-26 Identity = 62/98 (63.27%), Postives = 73/98 (74.49%), Query Frame = 1 Query: 196 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ-LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINA 486 S FKVAVLGA GGIGQPL+ML+K+N VS L L+D+ PGV ADI H++T + V G+ + LE AL G D+VIIPAGVPRKPGMTRDDLF NA Sbjct: 26 SRAFKVAVLGAGGGIGQPLSMLLKLNDKVSELALFDIRGAPGVAADIGHINTTSNVVGYAPDDKGLEKALNGADVVIIPAGVPRKPGMTRDDLFATNA 123
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_YEAST (Malate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=MDH1 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 2.819e-25 Identity = 57/96 (59.38%), Postives = 73/96 (76.04%), Query Frame = 1 Query: 205 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ--LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINA 486 +KV VLGA GGIGQPL++L+K+N V+ L LYD+ GV D+SH+ TN+VV+GF ++ L +AL D+V+IPAGVPRKPGMTRDDLF INA Sbjct: 18 YKVTVLGAGGGIGQPLSLLLKLNHKVTDLRLYDLKGAKGVATDLSHIPTNSVVKGFTPEEPDGLNNALKDTDMVLIPAGVPRKPGMTRDDLFAINA 113
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_SCHMA (Malate dehydrogenase, mitochondrial (Fragment) OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.399e-24 Identity = 52/87 (59.77%), Postives = 69/87 (79.31%), Query Frame = 1 Query: 226 AAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINA 486 A+GGIG+PL++L+K +PL+S L LYD+ + GV AD+SH++T A V LG +L + LTG ++VIIPAG+PRKPGMTRDDLFN NA Sbjct: 1 ASGGIGEPLSLLLKQSPLISQLALYDIAHVKGVAADLSHIETQAHVTAHLGPGELAECLTGANVVIIPAGLPRKPGMTRDDLFNTNA 87
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_PSEA6 (Malate dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=mdh PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.184e-23 Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ L++L+K P + L LYDV PGV D+SH+ T+ V GF G+ L ALTG DIV+IPAGVPRKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGTELALYDVAPVVPGVAVDLSHIPTDVKVEGF-GKDDLAKALTGSDIVLIPAGVPRKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHP_YEAST (Malate dehydrogenase, peroxisomal OS=Saccharomyces cerevisiae GN=MDH3 PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 1.184e-23 Identity = 50/94 (53.19%), Postives = 73/94 (77.66%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVA+LGA+GG+GQPL++L+K++P VS L LYD+ G+ D+SH++TN+ G+ + +E+ L+ +V+IPAGVPRKPG+TRDDLF +NAG Sbjct: 3 KVAILGASGGVGQPLSLLLKLSPYVSELALYDIRAAEGIGKDLSHINTNSSCVGY-DKDSIENTLSNAQVVLIPAGVPRKPGLTRDDLFKMNAG 95
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_COLP3 (Malate dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=mdh PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.020e-23 Identity = 60/96 (62.50%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ L++L+K P S L LYDV PGV D+SH+ T+ V GF G+ L ALTG DIV+IPAG+PRKPGM R DLFN+NAG Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVAGF-GRDDLNGALTGADIVLIPAGMPRKPGMDRADLFNVNAG 96 The following BLAST results are available for this feature:
BLAST of FC876238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876238 ID=FC876238; Name=FC876238; organism=Citrus clementina; type=EST; length=491bpback to top |