FC876238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_IDILO (Malate dehydrogenase OS=Idiomarina loihiensis GN=mdh PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.446e-23 Identity = 60/96 (62.50%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ L++L+K P S L LYDV PGV D+SH+ T+ V GF G+ L AL G DIV+IPAGVPRKPGM R DLFN+NAG Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVTGF-GKDDLASALVGSDIVLIPAGVPRKPGMDRSDLFNMNAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_ALTMD (Malate dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=mdh PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.879e-23 Identity = 60/96 (62.50%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ L++L+K P S L LYDV PGV D+SH+ T V G G+ L DALTG D+V+IPAG+PRKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSDLALYDVAPVVPGVAVDLSHIPTAVKVTGH-GKDDLADALTGADVVLIPAGMPRKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHEFN (Malate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.678e-23 Identity = 59/96 (61.46%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T+ V+GF GQ DAL G D+V++ AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTDVEVKGFAGQDPT-DALVGADVVLMSAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_MANSM (Malate dehydrogenase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=mdh PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.003e-22 Identity = 61/96 (63.54%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K+ P S L LYDV TPGV D+SH+ T+ VV GF G E AL G DIV+I AGV RKPGMTR DLF +NAG Sbjct: 2 KVAVLGAAGGIGQALALLLKLQLPAGSSLSLYDVAPVTPGVAKDLSHIPTDVVVEGFAGTDPSE-ALKGADIVLISAGVARKPGMTRADLFGVNAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_PASMU (Malate dehydrogenase OS=Pasteurella multocida GN=mdh PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.234e-22 Identity = 59/96 (61.46%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K+ P S L LYD+ TPGV AD+SH+ T V+GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKVQGFAGEDPTP-ALQGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_VIBMA (Malate dehydrogenase OS=Vibrio marinus GN=mdh PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.918e-22 Identity = 58/96 (60.42%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T+ + GF G DAL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSDLSLYDIAPVTPGVAVDLSHIPTDVTIAGFAGMDPT-DALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_MORS5 (Malate dehydrogenase OS=Moritella sp. (strain 5710) GN=mdh PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.918e-22 Identity = 58/96 (60.42%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T+ + GF G DAL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSDLSLYDIAPVTPGVAVDLSHIPTDVTIAGFAGMDPT-DALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_MORJA (Malate dehydrogenase OS=Moritella japonica GN=mdh PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.918e-22 Identity = 58/96 (60.42%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T+ + GF G DAL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAAVTPGVAVDLSHIPTDVTIAGFAGTDPT-DALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHEWM (Malate dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=mdh PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.977e-22 Identity = 59/96 (61.46%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T V+GF GQ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPADSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAGQDP-SPALEGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_ACTSZ (Malate dehydrogenase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=mdh PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.977e-22 Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KV +LGA+GGIGQPL++L+K++ P S L LYDV TPGV DISH+ T+ V GF G E AL G DIV+I AGV RKPGMTR DLFN+NAG Sbjct: 2 KVTLLGASGGIGQPLSLLLKLHLPAESDLSLYDVAPVTPGVAKDISHIPTSVEVEGFGGDDPSE-ALKGADIVLICAGVARKPGMTRADLFNVNAG 96 The following BLAST results are available for this feature:
BLAST of FC876238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876238 ID=FC876238; Name=FC876238; organism=Citrus clementina; type=EST; length=491bpback to top |