FC876241
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CBS_MOUSE (Cystathionine beta-synthase OS=Mus musculus GN=Cbs PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33 Identity = 88/206 (42.72%), Postives = 117/206 (56.80%), Query Frame = 1 Query: 148 IAKDVTELIGKTPLVYLNRIVD--GCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDP-AR--GMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKEHNPEIKLYGV 750 I D+ IG TP+V +N+I G + AK E SVKDRI MI DAE G ++PG+++ IEPTSGNTGIGLA AA KGYR II MP MS+E+ VL A GAE+V T AR + V A ++++ PNS++L Q+ N +NP HY+ T EI ++ +D LV+ + LKE P K+ GV Sbjct: 73 ILPDILRKIGNTPMVRINKISKNAGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGNLKPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDDTAEEILQQCDGKLDMLVASAGTGGTITGIARKLKEKCPGCKIIGV 277
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CBS_MACFA (Cystathionine beta-synthase OS=Macaca fascicularis GN=CBS PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33 Identity = 87/211 (41.23%), Postives = 120/211 (56.87%), Query Frame = 1 Query: 133 EEKSVIAKDVTELIGKTPLVYLNRIVD--GCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDP-AR--GMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKEHNPEIKLYGV 750 E+ I D+ + IG TP++ +N+I G + AK E SVKDRI MI DAE G ++PG+++ IEPTSGNTGIGLA AA +GYR II MP MS E+ VL A GAE+V T AR + V A ++++ PNS++L Q+ N +NP HY+TT EI ++ +D LV+ + LKE P ++ GV Sbjct: 71 EKSPKILPDILKKIGDTPMIRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLKPGDTI-IEPTSGNTGIGLALTAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILRQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGV 280
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CBS_HUMAN (Cystathionine beta-synthase OS=Homo sapiens GN=CBS PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.511e-32 Identity = 87/206 (42.23%), Postives = 118/206 (57.28%), Query Frame = 1 Query: 148 IAKDVTELIGKTPLVYLNRIVD--GCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDP-AR--GMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKEHNPEIKLYGV 750 I D+ + IG TP+V +N+I G + AK E SVKDRI MI DAE G ++PG+++ IEPTSGNTGIGLA AA +GYR II MP MS E+ VL A GAE+V T AR + V A ++++ PNS++L Q+ N +NP HY+TT EI ++ +D LV+ + LKE P ++ GV Sbjct: 76 ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGV 280
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSM_PSESY (Cysteine synthase B (Fragment) OS=Pseudomonas syringae pv. syringae GN=cysM PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.850e-31 Identity = 75/160 (46.88%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 160 VTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKR 639 + + +G TPLV L R+ + KLE P SVKDR SMI AE +G I PG++ LIE TSGNTGI LA AA KGYR+I+ MP + S ER+ + A+GAEL+ GM+GA AE ++ + VL QF N NP+ HY +TGPEIW++ Sbjct: 8 IADCVGNTPLVRLQRMAGNTSNTLLLKLEGNNPAGSVKDRPALSMITRAELRGQIHPGDT-LIEATSGNTGIALAMAAAIKGYRMILIMPDNSSAERKAAMTAYGAELISVSKDDGMEGARDLAERMQAE-GRGKVLDQFANGDNPEAHYTSTGPEIWRQ 165
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSM_CAMJE (Cysteine synthase B OS=Campylobacter jejuni GN=cysM PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.151e-30 Identity = 79/201 (39.30%), Postives = 111/201 (55.22%), Query Frame = 1 Query: 148 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKEHNPEIKLYGV 750 + + V+ELIG TP+++L + + AK E + P S+KDR + MI DA + I ++ ++E TSGNTGI LA + A G + I MP SMSLERR ++ FGA L LT GMKGAV KA EI TPNS+++ QFEN +N H + T EI + +D V+ + LKE ++ + GV Sbjct: 3 VHEKVSELIGNTPIIHLKKFG----INVFAKCEFLNPSHSIKDRAAFEMIKDALDSKKINQ-DTTIVEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMITLFGARLELTPANLGMKGAVDKANEILLNTPNSFMVSQFENISNKNAHRKNTALEILRDLDNELDIFVAGFGTGGTISGVGEILKEKLEKVHIVGV 198
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSM_MYCTU (Cysteine synthase B OS=Mycobacterium tuberculosis GN=cysM PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.668e-29 Identity = 74/162 (45.68%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 166 ELIGKTPLVYLNRIV-------DGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEI 630 + +G TPLV L R+ DG R+ AKLE P S+KDR MI AE GL+RPG ++L EPTSGNTGI LA A KGYRLI MP + S+ERR +L +GA+++ + G AV A+E+ P+ +L Q+ NPAN HY TGPE+ Sbjct: 9 QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL 169
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSM_MYCBO (Cysteine synthase B OS=Mycobacterium bovis GN=cysM PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.668e-29 Identity = 74/162 (45.68%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 166 ELIGKTPLVYLNRIV-------DGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEI 630 + +G TPLV L R+ DG R+ AKLE P S+KDR MI AE GL+RPG ++L EPTSGNTGI LA A KGYRLI MP + S+ERR +L +GA+++ + G AV A+E+ P+ +L Q+ NPAN HY TGPE+ Sbjct: 9 QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL 169
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSK1_SCHPO (Cysteine synthase 1 OS=Schizosaccharomyces pombe GN=cys11 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.261e-27 Identity = 73/185 (39.46%), Postives = 98/185 (52.97%), Query Frame = 1 Query: 172 IGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAEL--VLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKE 720 IG+TPL+ LN + + I AK E P SVKDR Y ++ DAE+KG + G ++E T+GNTGIGLA +A A+GY+ +I MP + S + L GAE+ V P +A + TPN+ QF+N AN HYETTGPEIW + + +D KYLKE Sbjct: 21 IGRTPLIRLNTLSNETGCNILAKAEFQNPGGSVKDRAAYYVVRDAEKKGKLSRG-GTIVEGTAGNTGIGLAHIARARGYKCVIYMPNTQSQAKIDTLKFLGAEVHPVPVAPFSNPLNYNHQARRHAESTPNASWTDQFDNVANLLSHYETTGPEIWDQTKGTVDGFTCSTGTGGTFAGVTKYLKE 204
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSK_EMENI (Cysteine synthase OS=Emericella nidulans GN=cysB PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.259e-27 Identity = 76/200 (38.00%), Postives = 105/200 (52.50%), Query Frame = 1 Query: 130 VEEKSVIAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGM---KGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKE 720 V + +TE IG TPL+ L R+ + + I AK E P SVKDR ++ DAEE+GL++PG +V +E T+GNTGIGLA + +KGY+L+I MP + S + +L GAE V PA + KA + N+ QF+N AN + H ETTGPEIW + +DA YLK+ Sbjct: 26 VSQAQGFVNGLTEAIGNTPLIRLKRLSEETGSNILAKAEFQNPGGSVKDRAALYVVKDAEERGLLKPGGTV-VEGTAGNTGIGLAHVCRSKGYKLVIYMPNTQSQGKIDLLRLLGAE-VYPVPAVAFDNPENYNHKARRHAESLDNAVWTNQFDNTANRRAHIETTGPEIWAQTGGKLDAFTCSTGTGGTLAGITYYLKQ 223
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSM_HELPY (Cysteine synthase OS=Helicobacter pylori GN=cysM PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.488e-27 Identity = 71/204 (34.80%), Postives = 115/204 (56.37%), Query Frame = 1 Query: 145 VIAKDVTELIGKTPLV-YLNRIVDGCV-ARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKEHNPEIKLYGV 750 +I + + IG+TP+ + N+ + + I AKLE + P SVKDR+G +I + + G I ++ +IEPT+GNTGI LA +A + I +P S E++ ++ A GA ++ T + G+ GA++K++E+ + P+SY+ QFENP NP +Y T PEI + + + V+ +YLKE P I+L GV Sbjct: 2 MIITTMQDAIGRTPVFKFTNKDYPIPLNSAIYAKLEHLNPGGSVKDRLGQYLIGEGFKTGKIT-SKTTIIEPTAGNTGIALALVAIKHHLKTIFVVPEKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGTARYLKERIPAIRLIGV 204 The following BLAST results are available for this feature:
BLAST of FC876241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876241 ID=FC876241; Name=FC876241; organism=Citrus clementina; type=EST; length=752bpback to top |