FC876241
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSM_HELPJ (Cysteine synthase OS=Helicobacter pylori J99 GN=cysM PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.488e-27 Identity = 72/204 (35.29%), Postives = 110/204 (53.92%), Query Frame = 1 Query: 145 VIAKDVTELIGKTPLVYLNR--IVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKEHNPEIKLYGV 750 +I + + IG+TP+ R + I AKLE + P SVKDR+G +I +A I + +IEPT+GNTGI LA +A + I +P S E++ ++ A GA ++ T + G+ GA++K++E+ + P+SY+ QFENP NP +Y T PEI + + + V+ KYLKE P I+L GV Sbjct: 1 MILTAMQDAIGRTPIFKFTRKDYPIPLKSAIYAKLEHLNPGGSVKDRLGQYLIKEAFRTRKIT-STTTIIEPTAGNTGIALALVAIKHHLKTIFVVPKKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGMAKYLKERIPNIRLIGV 203
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSK_YEAST (Putative cysteine synthase OS=Saccharomyces cerevisiae GN=YGR012W PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24 Identity = 74/197 (37.56%), Postives = 106/197 (53.81%), Query Frame = 1 Query: 160 VTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKG-LIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAEL------VLTDPARGMKGAVQKAEEIRDKTPN---SYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKE 720 V ELIG TPLV + + I AKLE+ P S KDR+ ++I AEE G L+R + E TSG+TGI +A + A GYR I++P SLE+ +L + GA + + DP + + A + E++ K+ N + QFEN AN K+HY+TTGPEI + + IDA ++ K+LKE Sbjct: 49 VEELIGNTPLVKIRSLTKATGVNIYAKLELCNPAGSAKDRVALNIIKTAEELGELVRGEPGWVFEGTSGSTGISIAVVCNALGYRAHISLPDDTSLEKLALLESLGATVNKVKPASIVDPNQYVNAAKKACNELK-KSGNGIRAVFADQFENEANWKVHYQTTGPEIAHQTKGNIDAFIAGCGTGGTITGVAKFLKE 244
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSK_DICDI (Cysteine synthase OS=Dictyostelium discoideum GN=cysK PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.190e-22 Identity = 64/202 (31.68%), Postives = 103/202 (50.99%), Query Frame = 1 Query: 142 SVIAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGA---VQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKEHNPEIK 738 S I+ + E +G TPL+ + + + I K E M P S KDR+ +I D E+KGL++ G S ++E T+G+TGI L + ++GY + + +P ++S E+ +L GAE + P GM A + A + ++ QF+N +N HY T EIW++ + +D V+ YLKE NP I+ Sbjct: 36 SGISNGIIETVGNTPLIRIKSLSEATGCEIYGKAEFMNPGGSPKDRVAREIILDGEKKGLLKKG-STIVEATAGSTGISLTMLGKSRGYNVQLFIPDNVSKEKVDLLEMLGAETKIV-PIVGMNNANHFMHCAYQRCLGDDMAFYANQFDNLSNFNAHYNGTAKEIWEQTKGDVDGFVAAAGTGGTVAGISSYLKEVNPNIQ 235
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSK2_SCHPO (Cysteine synthase 2 OS=Schizosaccharomyces pombe GN=cys12 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.200e-21 Identity = 68/206 (33.01%), Postives = 101/206 (49.03%), Query Frame = 1 Query: 148 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGES-VLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELV------LTDPARGMKGAVQKAEE--IRDKTPNS-YVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKEHNPEI 735 I V LIG T +V + + I AK E + P +S KDR+ MI AEE G + P +S + E T+G+TGI +A + + GY I MP+ S E+ +L GA + + DP + A + A + + P Y QFENPAN + H+ +TGPEIW++ +DA ++ +YLK +P I Sbjct: 42 IVNGVEGLIGNTKMVRIKSLSQATGCDILAKAEFLNPGNSPKDRVALQMIRTAEENGDLVPYQSNAVYEGTAGSTGISIAMLCCSLGYDSRIYMPSDQSKEKSDILELLGAHVQRVTPAPIVDPNHFVNTARRNAANHTVDESIPGKGYFANQFENPANWQAHFNSTGPEIWRQCAGKLDAFIAGSGTGGTIAGISRYLKSKDPSI 247
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: CYSM_RALME (Cysteine synthase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=cysM PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.421e-14 Identity = 57/206 (27.67%), Postives = 96/206 (46.60%), Query Frame = 1 Query: 145 VIAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGA--ELVLTDPARG--MKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKEHNPEIKLYGV 750 ++ + E IG TPLV L R+ A + AKLE++ P SVKDR ++ +G I P S +IE +SGN I LA + KG R + +S +L +GA E V ++G ++ +++ ++ + ++ + Q+ NP N + HY EI + D LV + L++ P +++ GV Sbjct: 1 MVCNSIIESIGNTPLVQLRRLFGRADAEVFAKLELLNPAGSVKDRPARYIVEKGLTEGAIGP-HSHVIESSSGNLAIALAMICGLKGLRFTAVVDPKISPTNLKILRCYGAGIEQVTAKDSQGGYLETRIERVRQMLREQRDAIWINQYANPLNWESHYYGEAAEILAQLAQPADVLVLGVSTSGTVHGIARRLRKAWPSMRVVGV 205
BLAST of FC876241 vs. ExPASy Swiss-Prot
Match: Y4XP_RHISN (Putative cysteine synthase OS=Rhizobium sp. (strain NGR234) GN=NGR_a00730 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.424e-14 Identity = 62/202 (30.69%), Postives = 101/202 (50.00%), Query Frame = 1 Query: 160 VTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAEL--VLTDPARGMKGAVQK---AEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKRHRW*IDALVSXXXXXXXXXXXXKYLKEHNPEIKLYGV 750 VT+LIG+TP++ ++ V G A + K+E P S+KDR+ SM+ A + G + PG ++ +E +SGNTG GLA A G R I + + ++ ++ A GAE+ V D V++ A ++ + P + + Q +NPANP+ Y E+ + IDA V + LK +NP ++ V Sbjct: 6 VTQLIGQTPVMSID--VPGRNATLVLKIEKNNPGGSMKDRMARSMVIAALQDGRLPPGGTI-VESSSGNTGTGLALAALEFGLRFIAVVDHHAAPDKIRMMRALGAEIRYVEGDFREDEVAVVERQRLAAQLGAQLPGALFMNQSDNPANPE-GYTGLVDELVAQLPDGIDAFVGCVGTGGSMTGISQRLKRNNPAVRTIAV 203 The following BLAST results are available for this feature:
BLAST of FC876241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876241 ID=FC876241; Name=FC876241; organism=Citrus clementina; type=EST; length=752bpback to top |