FC876243

Overview
NameFC876243
Unique NameFC876243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length656
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876243 vs. ExPASy Swiss-Prot
Match: ADK_YEAST (Adenosine kinase OS=Saccharomyces cerevisiae GN=ADO1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.340e-35
Identity = 80/193 (41.45%), Postives = 112/193 (58.03%), Query Frame = 1
Query:   88 LLGMGNPLLDISAVVDEEFLKKYDIKSNNAILAE----DKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSA 654
            L+ +GNPLLD  A V  E+L KY +K N+AIL +    D  + ++DEL      + +AGGA QN+ + A ++L   G   Y G +GKDKF E +   +  AGV   Y       TG CA  + G  RSLV +L AAN +  +HL +   W +VE AK +YI GF LTVSP++I  + +HA   +K F++N SA
Sbjct:    5 LVVLGNPLLDFQADVTAEYLAKYSLKENDAILVDAKSGDAKMAIFDELLQMPETKLVAGGAAQNTARGAAYVLGA-GQVVYFGSVGKDKFSERLLNENEKAGVKSMYQVQNDIGTGKCAALITGHNRSLVTDLGAANFFTPDHLDKH--WDLVEAAKLFYIGGFHLTVSPDAIVKLGQHAKENSKPFVLNFSA 194          
BLAST of FC876243 vs. ExPASy Swiss-Prot
Match: ADK_TOXGO (Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.964e-20
Identity = 60/191 (31.41%), Postives = 100/191 (52.36%), Query Frame = 1
Query:   88 LLGMGNPLLDISAVVDEEFLKKYDIKSNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIW-SIVEKAKYYYIAGFFLTVSPESIQMVAEHA-AAKNKVFMMNLSA 654
            +  +GNP+LD+ A V   FL ++ +K  +A LA  + + +Y  L  + N   + GG+  NS++V Q +L+ PG+  Y+G IG D  G+ +K+     G+  ++       TG CAV +   ER+L  +L A   +     + PE W +    A  +Y   + LT +P++   VA +A    N +F +NLSA
Sbjct:   15 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSF-----RLPEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSA 199          
The following BLAST results are available for this feature:
BLAST of FC876243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ADK_YEAST3.340e-3541.45Adenosine kinase OS=Saccharomyces cerevisiae GN=AD... [more]
ADK_TOXGO3.964e-2031.41Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32002C04EF DevOvary1 Citrus clementina cDNA clone C32002C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876243 ID=FC876243; Name=FC876243; organism=Citrus clementina; type=EST; length=656bp
GGCACCAAGTGAGATCTAGCCATTGAACTGAGCTTGTTAGTTGATCTCTT
TGTAAAATCTTTTGCATCAATGGCGTACGAAGGGATCCTGTTGGGCATGG
GAAACCCACTTCTTGACATTTCAGCGGTTGTCGACGAAGAGTTCTTGAAA
AAATATGACATCAAGTCGAACAATGCTATTCTTGCTGAAGACAAGCACTT
GCCCATGTATGATGAATTAGCTTCCAAAGAAAATGTGGAGTATATTGCTG
GGGGTGCCACACAAAATTCAATCAAAGTTGCCCAGTGGATGCTCCAAATT
CCTGGTGCTACTAGTTACATCGGCTGCATTGGAAAGGATAAGTTTGGAGA
GGAGATGAAGAAAAACTCAACAGCTGCTGGTGTCAATGTAAAATACTACG
AGGATGAATCTGCACCAACAGGGACATGTGCTGTTTGTGTTGTTGGTGGT
GAGAGGTCACTTGTGGCCAACTTGTCAGCTGCAAATTGTTACAAATCTGA
GCACTTGAAGAGACCTGAAATATGGTCAATAGTTGAAAAGGCAAAATATT
ACTACATTGCTGGGTTTTTCCTTACCGTGTCTCCTGAGTCCATTCAAATG
GTTGCTGAACACGCTGCTGCTAAGAACAAAGTCTTCATGATGAACCTTTC
TGCTCC
back to top