FC876248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.206e-61 Identity = 111/195 (56.92%), Postives = 155/195 (79.49%), Query Frame = 2 Query: 74 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQ--SKFTNVYVKNLSESTT 652 + SLYVG+L+ +VT++ L+++FN +G V S+RVCRD TRRSLGY YVN+ NA + RALE LN++ + G+ R+M+S RDP+LRK+G GNIFIKNLD++ID+KALHDTF+AFG+ILSCKV TD NG+S+G+ FV + E+A AI+ +NGMLLNDK+VYVGH + K+ER +++ + ++FTNVY+KN+ T Sbjct: 45 SASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRAQFTNVYIKNVDLEVT 239 HSP 2 Score: 107.842 bits (268), Expect = 4.955e-23 Identity = 63/186 (33.87%), Postives = 99/186 (53.23%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI-------------RVMYSHRDPSLR---KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQER 586 T++Y+ +++ VTD++ DL G +SV + RD S G+G+VN+ N + A +A++ LN +NGK + + SH + L KS N+++KNLD D L F AFG I S KV D +G S+G+GFV + + + A KA+ ++NG ++ K +YV RK R Sbjct: 227 TNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRD-EKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQRKDVR 411 HSP 3 Score: 102.834 bits (255), Expect = 1.594e-21 Identity = 63/210 (30.00%), Postives = 109/210 (51.90%), Query Frame = 2 Query: 71 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAG-------NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEI------------XQSKFTNVYVKNLSE 643 G ++++ +L+ ++ + L+D F G ++S +V D +S G+ +V++S + A A++ +N LN K + V + H R S N++IKN+D + D FG +S ++ D G SKG+GFV ++N ESA+KA+++LN +N K++Y G K ER+ E+ +S N+YVKNL + Sbjct: 132 GQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTD-ENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGH-HVGKKERLSKVEELRAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDD 339
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 236.113 bits (601), Expect = 1.206e-61 Identity = 110/190 (57.89%), Postives = 149/190 (78.42%), Query Frame = 2 Query: 80 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQS--KFTNVYVKNLSE 643 SLY+GDL +VT++ LY+ F+ G ++S+RVCRD++TRRSL Y Y+NF +A RAL+ +NF + G+PIR+M+S RDP LRKSG GN+FIKNLD++ID+KAL+DTFSAFGNILSCKV D +G S+GYGFV F+ E+A +AI+ +NGMLLND++V+VGHF ++ER+ E +FTNVY+KN E Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGE 200 HSP 2 Score: 124.79 bits (312), Expect = 3.917e-28 Identity = 72/209 (34.45%), Postives = 118/209 (56.46%), Query Frame = 2 Query: 71 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLRKSGA----GNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTE------------IXQSKFTNVYVKNLSE 643 G ++++ +L+ ++ + LYD F+ G ++S +V D S GYG+V+F + A RA++ +N LN + + V + S R+ L N++IKN + +D K L + FSAFGN LS KV D +G+S+G+GFV + N E AQKA+ ++NG +N + +YVG ++ ER +E I + + N+YVKNL + Sbjct: 97 GVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCD--EHGSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDD 303 HSP 3 Score: 108.997 bits (271), Expect = 2.224e-23 Identity = 65/204 (31.86%), Postives = 111/204 (54.41%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR----------------DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQSKFTNVYVKNLS 640 T++Y+ + ++ D +L ++F+ G +SV+V D + RS G+G+VN+ N +EA +A+ +N +NG+ I V + + + + N+++KNLD ID L F +G I S KV T+ G SKG+GFV F + E A KA+ ++NG +++ K +YV RK+ER ++ TN Y++ L+ Sbjct: 191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEER-----KAILTNQYMQRLA 387
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.058e-61 Identity = 110/190 (57.89%), Postives = 149/190 (78.42%), Query Frame = 2 Query: 80 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQS--KFTNVYVKNLSE 643 SLY+GDL +VT++ LY+ F+ G ++S+RVCRD++TRRSLGY Y+NF +A RAL+ +NF + G+PIR+M+S RDP LRKSG GN+FIKNLD +ID+KAL+DTFSAFG+ILSCKV D G S+GYGFV F+ +E+A +AI+ +NGMLLND++V+VGHF ++ER+ E +FTNVY+KN E Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGE 200 HSP 2 Score: 123.635 bits (309), Expect = 8.726e-28 Identity = 73/210 (34.76%), Postives = 119/210 (56.67%), Query Frame = 2 Query: 71 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRV-CRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLRKSGA----GNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTE------------IXQSKFTNVYVKNLSE 643 G ++++ +L+ ++ + LYD F+ G ++S +V C + +R GYG+V+F + A RA++ +N LN + + V + S R+ L N++IKN + +D K L + FSAFGN LS KV D +G+S+G+GFV + N E AQKA+ ++NG +N + VYVG ++ ER E I + + N+YVKNL + Sbjct: 97 GVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSR---GYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDD 303 HSP 3 Score: 110.538 bits (275), Expect = 7.645e-24 Identity = 65/204 (31.86%), Postives = 113/204 (55.39%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR----------------DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQSKFTNVYVKNLS 640 T++Y+ + ++ D +L ++F+ G +SV+V D ++ RS G+G+VN+ N +EA +A+ +N +NG+ + V + + + + N+++KNLD ID L FS +G I S KV T+ G SKG+GFV F + E A KA+ ++NG +++ K +YV RK+ER ++ TN Y++ L+ Sbjct: 191 TNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEER-----KAILTNQYMQRLA 387
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 2.688e-61 Identity = 112/194 (57.73%), Postives = 152/194 (78.35%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQSK--FTNVYVKNLSESTT 652 TSLYVG+L+ +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNF NA + RA+E LN++ + +P R+M+S RDP+LR++G GNIFIKNLD ID+KALHDTF+AFGNILSCKVAT+ G S GYGFV ++ E+A+ AI+ +NGMLLNDK+VYVGH + ++ER +I +++ FTNVY KN+ T Sbjct: 47 TSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNVYAKNVDPEVT 239 HSP 2 Score: 107.457 bits (267), Expect = 6.471e-23 Identity = 63/210 (30.00%), Postives = 115/210 (54.76%), Query Frame = 2 Query: 71 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY----SHRDPSLRKSGAG--NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQS----------KF--TNVYVKNLSES 646 G ++++ +L+A + + L+D F G ++S +V + + SLGYG+V++ A+ A A++ +N LN K + V + R + ++ A N++ KN+D + F+ FG I SC + D +G+SKG+GFV F++ AQKA+++L+ ++++V +K ER+ E+ +S KF N+Y+KN+ ES Sbjct: 133 GQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG--SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPES 340 HSP 3 Score: 101.679 bits (252), Expect = 3.551e-21 Identity = 58/190 (30.53%), Postives = 105/190 (55.26%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY----SHRDPSLRKSGAG------------NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEI 598 T++Y +++ VTD + LF + G++ S + RD +S G+G+VNF + EA +A++ L+ + G+ + V S R+ LR+S N+++KN+ ++ D + L + F+ FG I SCK+ +G S+G+GFV + E A KA+ ++NG +L+++ +YV RK R ++ Sbjct: 227 TNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRD-EDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVRRQQL 415
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: PABP_ASHGO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya gossypii GN=PAB1 PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 7.820e-61 Identity = 110/193 (56.99%), Postives = 151/193 (78.24%), Query Frame = 2 Query: 80 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQ--SKFTNVYVKNLSESTT 652 SLYVG+LE V+++ LYD+F+ +G V S+RVCRD T SLGY YVNF + + +A+E LN+T + GKP R+M+S RDPSLRK G+GNI+IKNL AID+K+LH+TFS FGNILSCKVATD NG S+G+GFV F+NE A+ AIE ++GML+ND++VYV + K++R +++ + +KFTNVYVKN+ + T+ Sbjct: 39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQLNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKFTNVYVKNIDQETS 231 HSP 2 Score: 98.9821 bits (245), Expect = 2.302e-20 Identity = 60/192 (31.25%), Postives = 99/192 (51.56%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRD----------------PSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQ 604 T++YV +++ + + +LF + G++ S + +D S + G+G+VNF + AA+A++ LN G+ + V + + L K N+F+KNLD +ID + L + F+ FG I S KV D G S+G+GFV F E A KAI + N ++ K +YV RK+ R ++ Q Sbjct: 219 TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKD-SEGKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKLKEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKEVRRNQLAQ 409
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 233.032 bits (593), Expect = 1.021e-60 Identity = 109/195 (55.90%), Postives = 155/195 (79.49%), Query Frame = 2 Query: 74 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQSK--FTNVYVKNLSESTT 652 + SLYVGDLE +V+++ LYD+F+ +G V S+RVCRD T+ SLGY YVNF++ + +A+E LN+TP+ G+ R+M+S RDPSLRK G+GNIFIKNL ID+KAL+DTFS FG+ILS K+ATD NG+SKG+GFV F+ E +A++AI+ LNGMLLN +++YV L ++ERD+++ ++K +TN+YVKN++ TT Sbjct: 37 SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETT 231 HSP 2 Score: 111.694 bits (278), Expect = 3.431e-24 Identity = 64/192 (33.33%), Postives = 104/192 (54.17%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV----------------MYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQ 604 T+LYV ++ + TD Q +LF + G +VS + +D + G+G+VN+ ++A +A+E LN + LNG+ + V ++R + K N+F+KNLD ++D + L + F+ +G I S KV NG+SKG+GFV F E A KAI + N ++ K +YV RK R +++ Q Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLK-GFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQ 409
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.129e-59 Identity = 108/195 (55.38%), Postives = 153/195 (78.46%), Query Frame = 2 Query: 74 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQSK--FTNVYVKNLSESTT 652 + SLYVG+L +V ++ L+++F+ +GQV S+RVCRD +++SLGY YVN+ ++ +A+E LN+TP+ G+P R+M+S RDPS R+SG GNIFIKNL AID+KALHDTFSAFG ILS KVATD GQSK +GFV ++ EE+AQ AIE +NGMLLND++VYVG + K++R++++ + K +TN+YVKN+ + T Sbjct: 66 SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYT 260 HSP 2 Score: 113.235 bits (282), Expect = 1.179e-24 Identity = 67/209 (32.06%), Postives = 115/209 (55.02%), Query Frame = 2 Query: 71 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI----RVMYSHRDPSLRKSGAG--NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQ----------SKF--TNVYVKNLSE 643 G ++++ +L + + L+D F+ G+++SV+V D +S +G+V++ + A A+E +N LN + + V R+ L + A NI++KN+D A K + F+ FG I S + D G+SKG+GFV F+ E+A KA+E+LN +N +++YVG +K+ER E+ + SK+ N++VKNL E Sbjct: 153 GDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATD-DLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDE 360 HSP 3 Score: 112.079 bits (279), Expect = 2.627e-24 Identity = 66/192 (34.38%), Postives = 105/192 (54.69%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRD----------------PSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQ 604 T++YV +++ T+ + +LF G++ S+ + +D + +S G+G+VNF + AA+A+E LN +NG+ I V + + L K N+F+KNLD+ ID + L + F FG I S KV D G+SKG+GFV F E A KAI ++N ++N K +YV RK R +++ Q Sbjct: 248 TNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKD-AEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVALAQRKDVRRSQLEQ 438
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 228.024 bits (580), Expect = 3.285e-59 Identity = 109/191 (57.07%), Postives = 152/191 (79.58%), Query Frame = 2 Query: 74 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQSK--FTNVYVKNLS 640 + SLYVG+L +V ++ L+++F+ +GQV S+RVCRD T++SLGY YVNF + +RA+E LN++ ++G+P R+M+S RDPSLR++G GNIFIKNL AID+KALHDTFSAFG ILSCKVATD GQSK +GFV ++ E+A+ AIE +NGMLLND++V+VG + K++R+++ + K FTNVYVKNL+ Sbjct: 57 SASLYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEELNYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFTNVYVKNLA 247 HSP 2 Score: 105.916 bits (263), Expect = 1.883e-22 Identity = 63/210 (30.00%), Postives = 117/210 (55.71%), Query Frame = 2 Query: 71 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV--MYSHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQ----------SKF--TNVYVKNLSES 646 G ++++ +L + + L+D F+ G+++S +V D +S +G+V++ A+ A A+E +N LN + + V S RD + K+ N+++KNL +D+ + F FG + S + TD G+S+G+GFV F+N ESA A++++N ++ +++YVG +K+ER E+ + SK+ N++VKNL +S Sbjct: 144 GDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATD-ELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDS 352 HSP 3 Score: 105.916 bits (263), Expect = 1.883e-22 Identity = 64/192 (33.33%), Postives = 102/192 (53.12%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI----------------RVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQ 604 T++YV +L V +++ ++F G V SV + D +S G+G+VNF N + A A++ +N ++G+ + R+ S R L K N+F+KNLD +ID + L + F FG I S +V D G+SKG+GFV F + E A KAI ++N ++ K +YV RK R +++ Q Sbjct: 239 TNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETD-QEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQRKDVRRSQLEQ 429
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: PABP_PICST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.604e-59 Identity = 105/190 (55.26%), Postives = 149/190 (78.42%), Query Frame = 2 Query: 74 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQSK--FTNVYVKNL 637 T SLYVG+L +V ++ L+++F+ +GQV S+RVCRD +++SLGY YVN+ ++ +A+E LN++P+ G+P R+M+S RDPS R+SG GNIFIKNL AID+KALHDTFS FG ILSCKVATD GQSK +GFV ++ E+A+ AIE +NGMLLND++V+VG + K++R+++ + K FTN+YVKN+ Sbjct: 51 TASLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAIEELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATDDMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKANFTNIYVKNI 240 HSP 2 Score: 105.145 bits (261), Expect = 3.212e-22 Identity = 65/192 (33.85%), Postives = 101/192 (52.60%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV---------------MYSH-RDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQ 604 T++YV +++ ++ L LF G + S+ + +D + +S G+G+VN+ + A +A+E LN +NG+ I V Y + R L K N+FIKNLD ID + L + F FG I S +V D G+SKG+GFV F + E A KAI ++N + K +YV RK R +++ Q Sbjct: 233 TNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKD-AEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGTITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYVALAQRKDVRRSQLEQ 423 HSP 3 Score: 102.834 bits (255), Expect = 1.594e-21 Identity = 62/210 (29.52%), Postives = 116/210 (55.24%), Query Frame = 2 Query: 71 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV--MYSHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQ----------SKF--TNVYVKNLSES 646 G ++++ +L + + L+D F+ G+++S +V D +S +G+V++ A+ A A+E +N LN + + V S +D + K+ NI++KN+D + L F+ +G I S + D G+SKG+GFV ++ E+A KA+E+LN +N +++YVG +K+ER E+ + SK+ N+++KNL ++ Sbjct: 138 GDGNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATD-DMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKANFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDT 346
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 5.604e-59 Identity = 108/194 (55.67%), Postives = 147/194 (75.77%), Query Frame = 2 Query: 68 FGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEI--XQSKFTNVYVKNLSE 643 + T SLYVGDL +VT++ LY+ F+ G ++S+R+CRDL T S Y YVNF + ++A AL+ +NF + GKP+R+M+S RDPSLRKSG GNIF+KNLDK+I++KAL+DT SAFGNILSC V D NG SKGYGFV F+ E+A++AI+K+NGMLLN ++V+VG F ++ER+ E+ +F NVY+KN E Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGE 200 HSP 2 Score: 131.339 bits (329), Expect = 4.185e-30 Identity = 76/209 (36.36%), Postives = 118/209 (56.46%), Query Frame = 2 Query: 71 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV-MYSHRDPSLRKSGAG-----NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQS------------KFTNVYVKNLSE 643 G +++V +L+ ++ + LYD + G ++S V D S GYG+V+F + A RA++ +N LNG+ + V + R + GA N++IKN + +D + L D F FG LS KV TD +G+SKG+GFV F+ E AQKA++++NG LN KQ+YVG +K ER TE+ ++ + N+YVKNL + Sbjct: 97 GVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCD--ENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDD 303 HSP 3 Score: 110.923 bits (276), Expect = 5.853e-24 Identity = 67/203 (33.00%), Postives = 110/203 (54.19%), Query Frame = 2 Query: 80 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI----------------RVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIXQSKFTNVYVKNLS 640 ++Y+ + ++ D +L DLF + G +SV+V D S + S G+G+V+F ++A +A++ +N LNGK I R + + + N+++KNLD ID + L FS FG I S KV + G+SKG+GFV F + E A KA+ ++NG ++ K +YV RK+ER Q+ TN Y++ ++ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER-----QAYLTNEYMQRMA 387 The following BLAST results are available for this feature:
BLAST of FC876248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876248 ID=FC876248; Name=FC876248; organism=Citrus clementina; type=EST; length=654bpback to top |