FC876251

Overview
NameFC876251
Unique NameFC876251
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876251 vs. ExPASy Swiss-Prot
Match: SAHH_MARMM (Adenosylhomocysteinase OS=Maricaulis maris (strain MCS10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.740e-36
Identity = 74/133 (55.64%), Postives = 92/133 (69.17%), Query Frame = 3
Query:  153 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPVGGPDLIVDDGG 551
            A+ + + VKD+S A +GR+E ++AE+EMPGLMA R E+  SQP KGA+I GSLHMT+QTA+LIETLTALGAEVRW SCNIFSTQDH               KGETL+EYW   +    W      ++I+DDGG
Sbjct:    5 AADKPYIVKDMSLAKWGRIEFDMAEIEMPGLMALREEYKDSQPLKGARIAGSLHMTVQTAILIETLTALGAEVRWASCNIFSTQDHAAAAIAETGVPVFATKGETLEEYWDYADAIFHWPDGETANMILDDGG 137          
BLAST of FC876251 vs. ExPASy Swiss-Prot
Match: SAHH_VARPS (Adenosylhomocysteinase OS=Variovorax paradoxus (strain S110) GN=ahcY PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.578e-36
Identity = 78/130 (60.00%), Postives = 91/130 (70.00%), Query Frame = 3
Query:  174 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPVG----GPDLIVDDGG 551
            + DLS A +GR EI++AE EMPGLMA R EF  +QP KGA+ITGSLHMTIQTAVLIETL ALGA VRW SCNIFSTQDH               KGE+L++YW  T    D+GP G    GP++I+DDGG
Sbjct:   17 IADLSLAAWGRKEIKIAETEMPGLMAIREEFSKAQPLKGARITGSLHMTIQTAVLIETLQALGATVRWASCNIFSTQDHAAAAIAAAGTPVFAIKGESLKDYWDYTHAIFDFGPKGSQGEGPNMILDDGG 146          
BLAST of FC876251 vs. ExPASy Swiss-Prot
Match: SAHH_RHOBA (Adenosylhomocysteinase OS=Rhodopirellula baltica GN=ahcY PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.578e-36
Identity = 75/128 (58.59%), Postives = 90/128 (70.31%), Query Frame = 3
Query:  168 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPVGGPDLIVDDGG 551
            +KVKD+S AD+GR EIELAE EMPGLMA R+++G  +P KGA+I G LHMTIQTAVLIETL  LGAEV W SCNIFSTQDH              WKG T +E+ WC E+ LD+      ++I+DDGG
Sbjct:   11 YKVKDISLADYGRKEIELAENEMPGLMALRSKYGAEKPLKGARIAGCLHMTIQTAVLIETLVELGAEVTWSSCNIFSTQDHAAAAIAAAGIPVYAWKGMTEEEFDWCIEQTLDFPSGEKLNMILDDGG 138          
BLAST of FC876251 vs. ExPASy Swiss-Prot
Match: SAHH_PROM2 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ahcY PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.578e-36
Identity = 78/141 (55.32%), Postives = 92/141 (65.25%), Query Frame = 3
Query:  129 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPVGGPDLIVDDGG 551
            M +S     S   F + D+S +DFGR EI++AE EMPGLMA R ++   +P KGAKI GSLHMTIQTAVLIETL  LGA+V+W SCNIFSTQDH               KGETL EYW  T   LDWG    P++I+DDGG
Sbjct:    1 MVISNSIKTSVPHFVISDISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAQVKWASCNIFSTQDHAAAAIADRGIPVFAKKGETLDEYWQYTHYILDWGS-DSPNMILDDGG 140          
BLAST of FC876251 vs. ExPASy Swiss-Prot
Match: SAHH_CANAL (Adenosylhomocysteinase OS=Candida albicans GN=SAH1 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 3.578e-36
Identity = 80/135 (59.26%), Postives = 91/135 (67.41%), Query Frame = 3
Query:  150 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPVGGP-DLIVDDGG 551
            SA    +KV D+S A FGR +IEL+E EMPGLM  R ++GPSQP KGA+I G LHMTIQTAVLIETL ALGAEV W SCNIFSTQDH              WKGET +EY WC E+ L     G   +LI+DDGG
Sbjct:    3 SAPATNYKVADISLAAFGRKDIELSENEMPGLMYIRKKYGPSQPLKGARIAGCLHMTIQTAVLIETLVALGAEVTWSSCNIFSTQDHAAAAIAAAGVPVFAWKGETEEEYQWCIEQQLFAFKDGKKLNLILDDGG 137          
BLAST of FC876251 vs. ExPASy Swiss-Prot
Match: SAHH_SCHPO (Adenosylhomocysteinase OS=Schizosaccharomyces pombe GN=SPBC8D2.18c PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.673e-36
Identity = 76/131 (58.02%), Postives = 91/131 (69.47%), Query Frame = 3
Query:  162 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPVGGP-DLIVDDGG 551
            + +KV D+S A FGR E+E+AE EMPGL+A R ++  SQP KGA+I G LHMTIQTAVLIETL ALGAEV W SCNI+STQDH              WKGET +EY WC E+ L   P G P ++I+DDGG
Sbjct:    4 QNYKVADISLAAFGRKELEIAENEMPGLIAVREKYAKSQPLKGARIAGCLHMTIQTAVLIETLVALGAEVTWSSCNIYSTQDHAAAAIAATGVPVFAWKGETEEEYLWCIEQQLKSFPSGKPLNMILDDGG 134          
BLAST of FC876251 vs. ExPASy Swiss-Prot
Match: SAHH_PROM0 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.673e-36
Identity = 78/141 (55.32%), Postives = 93/141 (65.96%), Query Frame = 3
Query:  129 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPVGGPDLIVDDGG 551
            M ++     S  +F + D+S +DFGR EI++AE EMPGLMA R ++   +P KGAKI GSLHMTIQTAVLIETL  LGAEV+W SCNIFSTQDH               KGETL EYW  T   LDWG    P++I+DDGG
Sbjct:    1 MVIANSVKTSTPKFIISDISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAEVKWASCNIFSTQDHAAAAIADQGISVFAKKGETLDEYWQYTHYILDWGS-DFPNMILDDGG 140          
BLAST of FC876251 vs. ExPASy Swiss-Prot
Match: SAHH_COREF (Adenosylhomocysteinase OS=Corynebacterium efficiens GN=ahcY PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.103e-36
Identity = 78/138 (56.52%), Postives = 90/138 (65.22%), Query Frame = 3
Query:  165 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH--------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW-GPVGGPDLIVDDGG 551
            +FKV DLS A+ GR +I LAE EMPGLM  R E+   QP KGA+I GS+HMT+QTAVLIETLTALGAEVRW SCNIFSTQD                       WKGETL EYWWC  +   W G +  P++I+DDGG
Sbjct:    6 DFKVADLSLAEAGRHQIRLAEYEMPGLMQLRREYAEEQPLKGARIAGSIHMTVQTAVLIETLTALGAEVRWASCNIFSTQDEAAAAIVVGDGTPEDPQGVPVFAWKGETLDEYWWCINQIFSWEGEL--PNMILDDGG 141          
BLAST of FC876251 vs. ExPASy Swiss-Prot
Match: SAHH_AZOSE (Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.971e-36
Identity = 76/129 (58.91%), Postives = 89/129 (68.99%), Query Frame = 3
Query:  165 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPVGGPDLIVDDGG 551
            ++ V DL+ A +GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETLTALGAEVRW SCNIFSTQDH               KGE+L +YW  T +  +W   G  ++I+DDGG
Sbjct:   10 DYVVADLALAGWGRKEIRIAETEMPGLMAIREEFAVVQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGESLADYWDYTHRIFEWRDGGYSNMILDDGG 138          
BLAST of FC876251 vs. ExPASy Swiss-Prot
Match: SAHH_POLSQ (Adenosylhomocysteinase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.041e-35
Identity = 73/126 (57.94%), Postives = 88/126 (69.84%), Query Frame = 3
Query:  174 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPVGGPDLIVDDGG 551
            + D+S +DFGR EI +AE EMPGL+A R EF   QP +GA+ITGSLHMTIQTAVLIETL ALGAEV+W SCNIFSTQDH               KGETL++YW  T +  +W   G  ++I+DDGG
Sbjct:   17 IADISLSDFGRKEIAIAETEMPGLIAIRDEFAAQQPLRGARITGSLHMTIQTAVLIETLEALGAEVQWASCNIFSTQDHAAAAIAANGTPVFAIKGETLEQYWDFTHRIFEWADGGYTNMILDDGG 142          
The following BLAST results are available for this feature:
BLAST of FC876251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
SAHH_MARMM2.740e-3655.64Adenosylhomocysteinase OS=Maricaulis maris (strain... [more]
SAHH_VARPS3.578e-3660.00Adenosylhomocysteinase OS=Variovorax paradoxus (st... [more]
SAHH_RHOBA3.578e-3658.59Adenosylhomocysteinase OS=Rhodopirellula baltica G... [more]
SAHH_PROM23.578e-3655.32Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_CANAL3.578e-3659.26Adenosylhomocysteinase OS=Candida albicans GN=SAH1... [more]
SAHH_SCHPO4.673e-3658.02Adenosylhomocysteinase OS=Schizosaccharomyces pomb... [more]
SAHH_PROM04.673e-3655.32Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_COREF6.103e-3656.52Adenosylhomocysteinase OS=Corynebacterium efficien... [more]
SAHH_AZOSE7.971e-3658.91Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN... [more]
SAHH_POLSQ1.041e-3557.94Adenosylhomocysteinase OS=Polynucleobacter sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionC32002D06EF DevOvary1 Citrus clementina cDNA clone C32002D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876251 ID=FC876251; Name=FC876251; organism=Citrus clementina; type=EST; length=553bp
GGCTCACACCCACTCTCTCTCTCTCTCGCTTGTACAATCATTCACTTTGT
TTGGTTAGTTTCCAAAGAGAGAGTAGATTGCCCTCTCTTCCTTCTTTCTT
TTAGATCTATCAATTCTATTAATCAACCATGGCTTTGTCCGTCGAGAAAT
CCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTC
GGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGC
TTGCCGCGCCGAGTTCGGCCCTTCACAGCCTTTCAAAGGAGCCAAGATCA
CCGGTTCACTCCACATGACCATCCAGACGGCCGTCCTCATCGAGACACTC
ACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAAC
CCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTG
CCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCC
CTGGACTGGGGTCCCGTCGGCGGCCCAGATCTCATCGTCGATGACGGTGG
TGA
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