FC876262

Overview
NameFC876262
Unique NameFC876262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 7.698e-19
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 3
Query:  150 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            FY ++CP  E ++R+++        + A   LR  FHDC V+ CD S+LLDS   + +EK+   +  +R F ++E +K AVE+ CPG VSCAD+L L  RD V
Sbjct:   28 FYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAV 130          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.005e-18
Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVV 461
            L MNFY ++CP AE I+++ V        + A + +R  FHDC V+ CD S+L++ST    +E++   +  +R F +I+ IK  +E +CPG+VSCADI+ L+ RD VV
Sbjct:   26 LQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGN-AERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVV 132          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.005e-18
Identity = 52/111 (46.85%), Postives = 60/111 (54.05%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVAL 467
            L  NFY   CP A   I+  V     +      S LR  FHDC VQ CDAS+LLD T     EK     +  +R F  I+ IK  VE  CPGVVSCADIL ++ RD VVAL
Sbjct:   24 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVAL 134          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.313e-18
Identity = 45/111 (40.54%), Postives = 67/111 (60.36%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLS-EKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVAL 467
            L M FY  TCP AE I+++ V        + A   +R  FHDC V+ CD S+L+++T      EK    +  +R F +I+ +K A+E +CPG+VSCADI+ L+ RD +VA+
Sbjct:   25 LKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAI 135          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.715e-18
Identity = 51/105 (48.57%), Postives = 62/105 (59.05%), Query Frame = 3
Query:  147 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            + Y  +CP    I+R+QVK+  K     A S +R  FHDC V  CDAS+LLD T    SEK  +     +R F  I+ IK AVE  CPGVVSCADIL L+ RD V
Sbjct:   33 DIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTN---SEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSV 134          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.240e-18
Identity = 42/109 (38.53%), Postives = 71/109 (65.14%), Query Frame = 3
Query:  135 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR-KTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            GL  ++Y+ TCP+ E+I+R  +  ++     +  + LR +FHDC VQ CDAS+LL+  R +  +E +  ++FG+R    + +IK ++E ECP  VSC+D+++L+ RD V
Sbjct:   37 GLSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAV 145          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18
Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            L+  FYK++CP AE+I++  +++   +    A S LR  FHDC V  CDAS+LLD+    LSEK+   +   +R F  I+ IK  +E  CP  VSC+DIL L+ RD V
Sbjct:   30 LLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSV 137          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.990e-18
Identity = 47/111 (42.34%), Postives = 63/111 (56.76%), Query Frame = 3
Query:  135 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVAL 467
            GL + FY  TCPQ E I+++ V     +        LR  FHDC V+ CD S+LLD       EK    +  +R F  I++ K A+E+ CPG+VSC+DIL L  RD +VAL
Sbjct:   25 GLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNNQ-GEKSAVPNLSLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVAL 134          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 4.990e-18
Identity = 49/109 (44.95%), Postives = 68/109 (62.39%), Query Frame = 3
Query:  138 LVMNFYK--DTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            L  ++YK  +TC  AE+ +R QV++ YK  K+ A   LR ++ DC V  CDAS+LL+      SEK   ++ G+  F  I+ IK  +E+ CPGVVSCADIL L+ RD V
Sbjct:   35 LTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGPN---SEKMAPQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAV 140          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.517e-18
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 3
Query:  129 DPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            +  L  ++Y  +CP AE II E V+             LR  FHDC ++ CDAS+LLDSTR   +EK+   +  +R+F  IE+ K  +E+ CP  VSCAD++ ++ RD V
Sbjct:   23 EAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNISVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVV 132          
The following BLAST results are available for this feature:
BLAST of FC876262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PER1_ORYSJ7.698e-1941.75Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER3_ARATH1.005e-1841.67Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER1_ARAHY1.005e-1846.85Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER39_ARATH1.313e-1840.54Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PERN_ARMRU1.715e-1848.57Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER29_ARATH2.240e-1838.53Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER20_ARATH2.925e-1843.52Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER27_ARATH4.990e-1842.34Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER26_ARATH4.990e-1844.95Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER66_ARATH6.517e-1840.00Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32002E11EF DevOvary1 Citrus clementina cDNA clone C32002E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876262 ID=FC876262; Name=FC876262; organism=Citrus clementina; type=EST; length=467bp
GAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGTACG
AAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCT
GAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATT
TTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAGGGAACAAGTT
AAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAA
CATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGG
ACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGT
ATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGA
GTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAG
ATGGCGTTGTTGCGCTT
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