FC876262

Overview
NameFC876262
Unique NameFC876262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:17..483. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.896e-17
Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 3
Query:  138 LVMNF--YKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVV 461
            LV++F  Y+++CP+AE I+   V+         A S LR  FHDC V  CDAS+LLD T   + EK    +   +R F  I++IK  +E  CP  VSCADIL ++ RD VV
Sbjct:   48 LVLDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVV 158          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.476e-17
Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVAL 467
            L   FY  TCP A   IR  ++     ++  A   +R +FHDC VQ CDASLLL       SE+    + G+  +  I+  K AVER CPGVVSCADIL ++ RD  VA+
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG---SERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAV 138          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.476e-17
Identity = 43/107 (40.19%), Postives = 65/107 (60.75%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDST--RKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRD 452
            L + +Y+ TCPQAE I++  ++    ++     + +R +FHDC V+ CDAS+LLD T    T  +     +  +R F  I+ IK+A+E  CPGVVSCADI+  + RD
Sbjct:   35 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARD 141          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.476e-17
Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVAL 467
            L   FY  TCP A   IR  ++     ++  A   +R +FHDC VQ CDASLLL       SE+    + G+  +  I+  K AVER CPGVVSCADIL ++ RD  VA+
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG---SERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAV 138          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.234e-17
Identity = 49/110 (44.55%), Postives = 62/110 (56.36%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVAL 467
            L   FY  +CP A   IR  V    ++      S LR  FHDC V+ CDASLLL+ T    S+   + +   R F  + +IK  VE  CPG+VSCADIL ++ RDGVVAL
Sbjct:   31 LSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTSGEQSQGP-NLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVAL 139          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.224e-17
Identity = 44/104 (42.31%), Postives = 58/104 (55.77%), Query Frame = 3
Query:  150 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            FY  TCP A  I+R  ++  ++       S +R  FHDC V  CDAS+LLD +    SEK     +   R F  ++NIK A+E  CPGVVSC+DIL L+    V
Sbjct:    6 FYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASV 109          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.224e-17
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 3
Query:  135 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVV 461
            G  + FY  TCP+AE I+R  V   +      A   LR  FHDC VQ CD S+L+       +E+    +  ++ F  I+N K  +E  CPGVVSCADIL L+ RD V+
Sbjct:   34 GTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGAN---TERTAGPNLNLQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVI 139          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.517e-17
Identity = 44/104 (42.31%), Postives = 57/104 (54.81%), Query Frame = 3
Query:  150 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            FY  TCP A  I+R  ++   +       S +R  FHDC V  CDAS+LLD T    SEK    +    R F  ++NIK A+E  CPGVVSC+D+L L+    V
Sbjct:   36 FYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASV 139          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 7.205e-17
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 3
Query:  135 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVA 464
            G  + FY  TCP+AE I++  V+  ++     A   LR  FHDC V  CD S+L++ +    +E+    +  ++ F  IE+ K  +E  CPGVVSCADIL L+ RD VVA
Sbjct:   31 GTRVGFYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGSD---AERTAIPNRNLKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVA 137          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 9.410e-17
Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            L + FY +TCPQAE I++  V        N     LR  FHDC V+ CD S+L+++    +SEK      G+R F  +E +K  +E  CPGVVSC+DI+ L+ RD +
Sbjct:   26 LEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNN--GAISEKNAFGHEGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAI 130          
The following BLAST results are available for this feature:
BLAST of FC876262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PER40_ARATH1.896e-1743.24Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER2_ZINEL2.476e-1743.64Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER2_MAIZE2.476e-1740.19Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER1_ZINEL2.476e-1743.64Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER66_MAIZE3.234e-1744.55Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PERA2_ARMRU4.224e-1742.31Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER71_ARATH4.224e-1741.28Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER53_ARATH5.517e-1742.31Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PERN1_TOBAC7.205e-1740.91Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER43_ARATH9.410e-1741.12Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32002E11EF DevOvary1 Citrus clementina cDNA clone C32002E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876262 ID=FC876262; Name=FC876262; organism=Citrus clementina; type=EST; length=467bp
GAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGTACG
AAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCT
GAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATT
TTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAGGGAACAAGTT
AAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAA
CATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGG
ACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGT
ATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGA
GTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAG
ATGGCGTTGTTGCGCTT
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