FC876262

Overview
NameFC876262
Unique NameFC876262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:17..483. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.700e-13
Identity = 44/113 (38.94%), Postives = 60/113 (53.10%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVA 464
            L   FY  TCP  E I+R  V+   K+      + LR  FHDC V  CDAS+++ ST K  +EK+   +  +    F  +   K+A++    C   VSCADIL L+ RD VVA
Sbjct:   27 LSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVA 139          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.833e-13
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 3
Query:  147 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVV 461
            +FY  TCP   +II + +    +     A S LR  FHDC V+ CDAS+LLD++    +EK+    +   R F  I+ +K ++ER CP  VSCAD+L ++ +  V+
Sbjct:   34 DFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVL 139          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.833e-13
Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD---RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            L + FY  +CP AE ++R+ V   + +    A   +R  FHDC V+ CD S+LL +      + E D    +  +R F  I+  K AVE+ CP  VSCADI+  + RD +
Sbjct:   35 LRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLL-TVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSI 143          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.312e-13
Identity = 43/103 (41.75%), Postives = 53/103 (51.46%), Query Frame = 3
Query:  150 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            +Y   C   E I+R  V+  Y  +   A   LR  FHDC VQ CDAS+LL       SE+    +  +R F  IE  K  +E  CP  VSCADIL L+ RD V
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPN---SERTAIPNLSLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFV 137          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 8.243e-13
Identity = 41/112 (36.61%), Postives = 62/112 (55.36%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE--MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVAL 467
            L ++FY  +CP+  DIIRE +         TA + LR  FHDC    CDAS+L+ ST    +E++  ++ S     F  +   K A+E  CP  VSC+DI+ ++ RD +V +
Sbjct:   32 LTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTV 143          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVA 464
            L  NFY ++CP  E I+++ V+   K+   T  + LR  FHDC V  CDAS+++ ST    +EK+   +  +    F  +   K+A++    C   VSCADIL L+ RD VVA
Sbjct:   27 LKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVA 139          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12
Identity = 42/106 (39.62%), Postives = 54/106 (50.94%), Query Frame = 3
Query:  144 MNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVV 461
            + FY + C   E I+R  V+   +     A   LR  FHDC V  CD S+LL       SE+    +  +R F  IE  K  +E+ CP  VSCADIL L+ RD VV
Sbjct:   39 VGFYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNT---SERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVV 141          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12
Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRK--TLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV 458
            L  +FY  TCP    I R  ++   +         +R  FHDC V  CD S+LLD+        EKE  ++ G +  F  I++IK A+E  CPGVVSCADIL ++    V
Sbjct:   25 LTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISV 134          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.836e-12
Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 3
Query:  147 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVER--ECPGVVSCADILVLSGRDGV 458
            NFY  +CP  E I+R  V+   ++   T  + LR  FHDC V  CDAS+++ ST    +EK+ + +  +    F  +   KEA++    C   VSCADIL ++ RD V
Sbjct:   30 NFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVV 137          
BLAST of FC876262 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.398e-12
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 3
Query:  147 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVER--ECPGVVSCADILVLSGRDGV 458
            +FY  TCP  E I+R  V+   ++   T  + LR  FHDC V  CDAS+++ ST    +EK+ + +  +    F  +   KEAV+    C   VSCADIL ++ RD V
Sbjct:   30 DFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVV 137          
The following BLAST results are available for this feature:
BLAST of FC876262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PER35_ARATH3.700e-1338.94Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER3_ARMRU4.833e-1337.74Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER1_MAIZE4.833e-1336.36Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER70_ARATH6.312e-1341.75Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER63_ARATH8.243e-1336.61Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER73_ARATH1.077e-1238.05Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER69_ARATH1.077e-1239.62Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER58_ARATH1.077e-1238.18Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER50_ARATH1.836e-1237.04Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER51_ARATH2.398e-1237.96Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32002E11EF DevOvary1 Citrus clementina cDNA clone C32002E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876262 ID=FC876262; Name=FC876262; organism=Citrus clementina; type=EST; length=467bp
GAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGTACG
AAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCT
GAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATT
TTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAGGGAACAAGTT
AAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAA
CATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGG
ACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGT
ATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGA
GTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAG
ATGGCGTTGTTGCGCTT
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