FC876264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CYAP4 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxr PE=3 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.066e-80 Identity = 144/212 (67.92%), Postives = 182/212 (85.85%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K I++LGSTGSIGTQTLDIVA++ D+FR+V LAAG ++ L Q+++F+PQ+VA+ +E LD++K A+A+++ +P ++AG GV E A + DA TVVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL ++ +K+LPADSEHSAIFQC+QG+P G LRRI+LTASGGAFRDWPV+KL +V +ADALKHPNWSMG+KITVDSA Sbjct: 2 KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGLAAGRSLDKLIPQIRQFRPQIVALADEQQLDDLKAAIADLDPQPILVAGPAGVCEVAAYGDAKTVVTGIVGCAGLLPTIAAIKAGKDIALANKETLIAGGPVVLPLVEQYGVKLLPADSEHSAIFQCLQGVPAGGLRRILLTASGGAFRDWPVDKLGQVTIADALKHPNWSMGQKITVDSA 213
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_THEEB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxr PE=3 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.818e-80 Identity = 144/212 (67.92%), Postives = 180/212 (84.91%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K +++LGSTGSIGTQTLDIVA++ D+FRVV LAAG N+ L Q+++F+P++V++ + L E++ ALA++ +KP+++AGE G+ A + DA VVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL ++ +K+LPADSEHSAIFQC+QG+PEG LR+IILTASGGAFRDWPVEKL +V VADALKHPNWSMG KITVDSA Sbjct: 20 KALNLLGSTGSIGTQTLDIVAQYPDRFRVVGLAAGRNLERLIPQIRQFQPEIVSIADPEQLPELEAALADLPQKPQLVAGEAGIAAVAAYGDAEVVVTGIVGCAGLVPTIAAIKAGKDIALANKETLIAGGPVVLPLLQEYGVKLLPADSEHSAIFQCLQGVPEGGLRKIILTASGGAFRDWPVEKLAQVTVADALKHPNWSMGPKITVDSA 231
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CYAP7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7424) GN=dxr PE=3 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.818e-80 Identity = 147/212 (69.34%), Postives = 181/212 (85.38%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K ISVLGSTGSIGTQTLDIVA++ D+F+VV LAAG+N+ LL+ QV +F+P++VA+ N L+ +KE+L++++ P IL GEQG++E A + DA +VVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL KH +K+LPADSEHSAIFQC+QG+PE LR+I+LTASGG+FRD PVEKL V V DALKHPNWSMG+KIT+DSA Sbjct: 2 KKISVLGSTGSIGTQTLDIVAQYPDQFQVVGLAAGNNVELLSAQVHQFRPEIVAICNLDHLEVLKESLSSLDYSPIILGGEQGIVEVAGYGDAQSVVTGIVGCAGLLPTIAAIKAGKDIALANKETLIAGGPVVLPLIEKHGVKLLPADSEHSAIFQCLQGVPEKGLRKILLTASGGSFRDLPVEKLSTVTVQDALKHPNWSMGRKITIDSA 213
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SYNJA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxr PE=3 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 9.974e-79 Identity = 139/210 (66.19%), Postives = 175/210 (83.33%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 I++LGSTGSIGTQTLD+VA++ ++FRVV L + SN+TLLA+QV RF+PQ+VA+ E LL E++ L + PE++AG +G+ + A HP A VVTGIVGCAGL PT+AAI AGKDIALANKETL+AGGP VLPL ++ +K++P DSEHSAIFQC+QG+P G+LRRI+LTASGGAFRDWP EKL +V +ADALKHPNW MG+KIT+DSA Sbjct: 4 ITLLGSTGSIGTQTLDLVAQYPERFRVVGLTSYSNVTLLAEQVWRFRPQIVAIGREELLPELRSLLTGMRPLPELVAGTEGLCQVAAHPAAQRVVTGIVGCAGLLPTLAAIRAGKDIALANKETLVAGGPVVLPLVREYGVKLIPVDSEHSAIFQCLQGVPPGSLRRILLTASGGAFRDWPAEKLDQVTLADALKHPNWVMGRKITIDSA 213
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SYNY3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechocystis sp. (strain PCC 6803) GN=dxr PE=3 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 1.701e-78 Identity = 147/213 (69.01%), Postives = 174/213 (81.69%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE-KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K IS+LGSTGSIGTQTLDIV H D F+VV LAAG N+ LLA QV F+P++VA+R L+++K A+A + + +P + GE+GV+E AR+ DA +VVTGIVGCAGL PT+AAI AGKDIALANKETLIAG P VLPL K +K+LPADSEHSAIFQC+QG+PEG LRRIILTASGGAFRD PVE+L V V DALKHPNWSMG+KIT+DSA Sbjct: 3 KRISILGSTGSIGTQTLDIVTHHPDAFQVVGLAAGGNVALLAQQVAEFRPEIVAIRQAEKLEDLKAAVAELTDYQPMYVVGEEGVVEVARYGDAESVVTGIVGCAGLLPTMAAIAAGKDIALANKETLIAGAPVVLPLVEKMGVKLLPADSEHSAIFQCLQGVPEGGLRRIILTASGGAFRDLPVERLPFVTVQDALKHPNWSMGQKITIDSA 215
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SYNP6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dxr PE=1 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.103e-77 Identity = 145/222 (65.32%), Postives = 178/222 (80.18%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGA----------LRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K +++LGSTGSIGTQTLDI+ ++ D+FR+V LAAG N+ LL++Q++R +P++VA+++ + L E++ A+A+++ P IL GE GV E AR+ DA VVTGIVGCAGL PT+AAIEAGKDIALANKETLIA GP VLPL KH + I PADSEHSAIFQCIQGL A LRRI+LTASGGAFRDWPVE+L +V VADALKHPNWSMG+KITVDSA Sbjct: 2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPPLILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAAGPVVLPLLQKHGVTITPADSEHSAIFQCIQGLSTHADFRPAQVVAGLRRILLTASGGAFRDWPVERLSQVTVADALKHPNWSMGRKITVDSA 223
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SYNJB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. GN=dxr PE=3 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.103e-77 Identity = 136/210 (64.76%), Postives = 174/210 (82.86%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 I++LGSTGSIGTQTLD+VA++ ++F+VV L + SN+ LLA+QV+RF+PQ+VA+ E LL E++ L + PE++AG +G+ + A HP A VVTGIVGCAGL PT+AAI AGKDIALANKETL+AGGP VLPL ++ + ++P DSEHSAIFQC+QG+P G+LRRI+LTASGGAFRDWP EKL +V +ADALKHPNW MG+KIT+DSA Sbjct: 4 ITLLGSTGSIGTQTLDLVAQYPERFQVVGLTSYSNVALLAEQVRRFRPQMVAIGREELLPELRSLLTGIRPLPELVAGTEGLCQVAAHPAAQRVVTGIVGCAGLLPTLAAIRAGKDIALANKETLVAGGPVVLPLVREYGVNLIPVDSEHSAIFQCLQGVPAGSLRRILLTASGGAFRDWPAEKLDQVTLADALKHPNWVMGRKITIDSA 213
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SYNE7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus elongatus (strain PCC 7942) GN=dxr PE=3 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.103e-77 Identity = 145/222 (65.32%), Postives = 178/222 (80.18%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGA----------LRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K +++LGSTGSIGTQTLDI+ ++ D+FR+V LAAG N+ LL++Q++R +P++VA+++ + L E++ A+A+++ P IL GE GV E AR+ DA VVTGIVGCAGL PT+AAIEAGKDIALANKETLIA GP VLPL KH + I PADSEHSAIFQCIQGL A LRRI+LTASGGAFRDWPVE+L +V VADALKHPNWSMG+KITVDSA Sbjct: 2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPPLILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAAGPVVLPLLQKHGVTITPADSEHSAIFQCIQGLSTHADFRPAQVVAGLRRILLTASGGAFRDWPVERLSQVTVADALKHPNWSMGRKITVDSA 223
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_GLOVI (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Gloeobacter violaceus GN=dxr PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.811e-73 Identity = 135/212 (63.68%), Postives = 165/212 (77.83%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K I++LGSTGSIGTQTLDIVAE+ ++F V + A SN+ LLA+Q++RF+PQVVAV +E+ + LA + PE+ GE+G A A VVTGIVGCAGL PT+AA++AG+D+ALANKETL+AGGP V+P +K+LP DSEHSAIFQC+QG+PEGAL+RI+LTASGGAFRDWPVEKL E ADALKHPNW MG KITVDSA Sbjct: 2 KHIALLGSTGSIGTQTLDIVAEYPERFAVTGMTAHSNMELLAEQIRRFRPQVVAVGSEARRAALAALLAGFDGMPEMFVGEKGCCTVASQAPAEVVVTGIVGCAGLMPTLAAVDAGRDLALANKETLVAGGPVVMPRIRARGVKLLPVDSEHSAIFQCLQGVPEGALKRILLTASGGAFRDWPVEKLAEATTADALKHPNWVMGAKITVDSA 213
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PROM9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9312) GN=dxr PE=3 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.463e-69 Identity = 136/226 (60.18%), Postives = 168/226 (74.34%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE--EKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE------------GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K I+VLGSTGSIGTQTL+I +E DKF+ VAL+AG NITLL +QVK KP+VVA+ +E+L++++K+ + N++ P +L G++G+ A A TV+TGIVGCAGL PT++AI AGK+IALANKETLIA GP V+P K+N ++LPADSEHSAIFQC+QGLP L+ I LTASGGAFRDWPVE LK V V DA HPNW MGKKITVDSA Sbjct: 2 KYITVLGSTGSIGTQTLEIASEQPDKFKAVALSAGRNITLLTEQVKTHKPEVVAIEDENLIEDLKDNINNLDLDSAPLVLGGKEGINAVAAWDKADTVITGIVGCAGLIPTMSAINAGKNIALANKETLIAAGPIVIPALKKNNSRLLPADSEHSAIFQCLQGLPNYENADFSTGVMPKGLKAIHLTASGGAFRDWPVENLKHVTVEDATSHPNWDMGKKITVDSA 227 The following BLAST results are available for this feature:
BLAST of FC876264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876264 ID=FC876264; Name=FC876264; organism=Citrus clementina; type=EST; length=723bpback to top |