FC876264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_LISMH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dxr PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.239e-45 Identity = 100/212 (47.17%), Postives = 138/212 (65.09%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K I +LG+TGSIGTQTL I+ E+ +KF+VVAL+ G N+ +K FKP++VAV + ++ NV+ G +G+ E A + D ++ ++G GL PT+ AIEAGK IA+ANKETL+ G V+ A + NI +LP DSEHSAI Q + G + +I+LTASGG+FRD E+L V V +ALKHPNW+MG K+T+DSA Sbjct: 2 KKIILLGATGSIGTQTLAIIRENPEKFQVVALSFGRNMERGRAIIKEFKPKMVAVWHTRDRVTLEAEFPNVK----FFNGLEGLREVATYLDGDVLLNAVMGSVGLLPTLDAIEAGKAIAIANKETLVTAGHLVMRAAKEKNISLLPVDSEHSAILQALNGENTERIEKIVLTASGGSFRDKTREQLSLVTVKEALKHPNWNMGNKLTIDSA 209
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_LISIN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Listeria innocua GN=dxr PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.239e-45 Identity = 100/214 (46.73%), Postives = 139/214 (64.95%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI--LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K I +LG+TGSIGTQTL I+ E+ +KF++VA + G NI ++ FKP++VAV + ++ + E P++ G G+ E A + D ++ ++G GL PT+ AIEAGK IA+ANKETL+ G V+ A + NI +LP DSEHSAI Q + G + +IILTASGG+FRD E+L EV V +ALKHPNW+MG K+T+DSA Sbjct: 2 KKIILLGATGSIGTQTLTIIRENPEKFQLVAFSFGRNIERGRAIIQEFKPKMVAVWHT------RDRVTLESEFPDVKFFNGLDGLREVATYLDGDVLLNAVMGSVGLLPTLDAIEAGKAIAIANKETLVTAGHLVMQAAKEKNISLLPVDSEHSAILQALNGENRERIEKIILTASGGSFRDKTREQLSEVTVKEALKHPNWNMGNKLTIDSA 209
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_RHOPB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhodopseudomonas palustris (strain BisB18) GN=dxr PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.230e-45 Identity = 95/214 (44.39%), Postives = 136/214 (63.55%), Query Frame = 1 Query: 82 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 G + +SVLG+TGSIG T+D++ ++++V AL A +N+ LA + F + VAV + + L E++ ALA AG+ ++EAA P A V+ + G AGLKPT+AA++ G +ALANKE L+ G F + A K ILPADSEH+A+FQ + L ++I+TASGG FR W +++ +A ALKHPNWSMG+KIT+DSA Sbjct: 15 GVRSVSVLGATGSIGDSTMDLLRASPERYQVEALTANTNVAGLAKLAREFNARFVAVADPARLSELRAALAGTGIACG--AGDSAIVEAAERP-ADWVMAAVAGAAGLKPTLAAVDRGAHVALANKECLVCAGEFFMDRAAKAGATILPADSEHNALFQALASGNRDELTKVIITASGGPFRTWAAADIEQATLAQALKHPNWSMGQKITIDSA 225
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_RALPJ (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Ralstonia pickettii (strain 12J) GN=dxr PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.230e-45 Identity = 95/213 (44.60%), Postives = 133/213 (62.44%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI-QGLPE--GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 ++VLG+TGSIG TLD+V H DK+ V AL A + LA + F+P++ + + + D +++ L EI +G + + EAA HPD V+ IVG AGL+PT+AA+ AGK + LANKE L+ G + +H +LP DSEH+AIFQC+ Q +P+ + RI+LTASGG FR V+ L +V A HPNW MG+KI+VDSA Sbjct: 4 LTVLGATGSIGDSTLDVVRRHPDKYSVFALTANAQADKLAVLCREFRPKMAVLGSAAAADALRDQLGTEAAGIEICSGTKALEEAAAHPDCDAVMAAIVGAAGLRPTLAAVRAGKRVLLANKEALVMSGALFMDAVREHGATVLPIDSEHNAIFQCLPQQVPQFGRGVSRIVLTASGGPFRTRAVDSLADVTPDQACAHPNWVMGRKISVDSA 216
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PSEPG (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pseudomonas putida (strain GB-1) GN=dxr PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.524e-45 Identity = 96/218 (44.04%), Postives = 133/218 (61.01%), Query Frame = 1 Query: 85 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI-----QGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 P+ I+VLG+TGSIG TLD++A H D+++ AL+ S + L R +P V + ++ +LA E+L GE G+ + A + V+ IVG AGL+PT+AA+EAGK + LANKE L+ G + + +LP DSEH+AIFQC+ +GL +RRI+LTASGG FR+ PVE L +V A HPNWSMG+KI+VDSA Sbjct: 4 PQRITVLGATGSIGLSTLDVIARHPDRYQAFALSGYSRVDELLALCVRHRPAFAVVPSAEAAARLRASLAAAGCATEVLEGEAGLCQVASAAEVDAVMAAIVGAAGLRPTLAAVEAGKKVLLANKEALVMSGALFMEAVRRSGAVLLPIDSEHNAIFQCMPGDYARGLSAVGVRRILLTASGGPFRETPVEALLDVTPEQACAHPNWSMGRKISVDSA 221
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_BRASB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=dxr PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.524e-45 Identity = 98/212 (46.23%), Postives = 136/212 (64.15%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + I+VLG+TGSIG T+D++ +++RV AL SN+ LA + FKP VAV + + L+E+++ALA AGE +IEAA P A V+ + G AGLKP +AA++ G +ALANKE L+ G F + A + ILPADSEH+A+FQ + L R+I+TASGG FR W +++ +A ALKHPNWSMG+KIT+DSA Sbjct: 17 RSITVLGATGSIGESTMDLLRGAPERYRVEALTGNSNVQGLAKLAREFKPGFVAVADPARLNELRDALAGTGIACG--AGESAIIEAAARP-ADWVMAAVSGAAGLKPALAAVDRGATVALANKECLVCAGDFFMQRAAQAGACILPADSEHNALFQALSSGNREELVRVIITASGGPFRTWAAADIEQATLAQALKHPNWSMGQKITIDSA 225
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_BRAJA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bradyrhizobium japonicum GN=dxr PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.524e-45 Identity = 98/212 (46.23%), Postives = 132/212 (62.26%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + ++VLG+TGSIG T+D++ +++RV AL A N+ LA K F + VA+ + S E+K ALA E AGE VIEA P A V+ + G AGLKP +AA++ G +ALANKE L+ G F + A K ILPADSEH+A+FQ + L R+I+TASGG FR W +++ +A ALKHPNWSMG+KIT+DSA Sbjct: 17 RSVTVLGATGSIGDSTMDLLRASPERYRVEALTANGNVEALAKLAKEFSARFVAIADTSKFAELKAALAGTST--ECGAGESAVIEAGARP-ADWVMAAVSGAAGLKPALAAVDRGAHVALANKECLVCAGDFFMQRAAKAGACILPADSEHNALFQALGSGNRDELVRVIITASGGPFRTWKPADIEQATLAQALKHPNWSMGQKITIDSA 225
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PSESM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pseudomonas syringae pv. tomato GN=dxr PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.215e-45 Identity = 97/219 (44.29%), Postives = 134/219 (61.19%), Query Frame = 1 Query: 82 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI-----QGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 GP+ I++LG+TGSIG TLD+VA H ++V AL S + L + PQ V + ++++ LA +L GE G+ E A HP V+ IVG AGL+PT+AA+EAGK + LANKE L+ G + + +LP DSEH+AIFQC+ +GL +RRI+LTASGG FR+ P+E+L++V A HP WSMG+KI+VDSA Sbjct: 3 GPQHITILGATGSIGLSTLDVVARHPTLYQVFALTGFSRLDELLALCIKHTPQYAVVPEQVAARKLQDDLAAAGLDTRVLVGEGGLCEVAAHPMVDAVMAAIVGAAGLRPTLAAVEAGKKVLLANKEALVMSGALFMQAVRQSGAVLLPIDSEHNAIFQCLPGDFARGLGAVGVRRIMLTASGGPFRETPLEQLQDVTPEQACAHPVWSMGRKISVDSA 221
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_ZYMMO (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Zymomonas mobilis GN=dxr PE=1 SV=3) HSP 1 Score: 180.259 bits (456), Expect = 9.423e-45 Identity = 95/213 (44.60%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 85 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 P+ ++VLG+TGSIG TLD++ + D+++V+AL A N+ LAD KR + + + SL +++KEALA E AG ++EAA A + I+GCAGLK T+AAI GK +ALANKE+L++ G ++ +H +LP DSEH+AIFQC +RRII+TASGG FR + ++ V A++HPNWSMG KI++DSA Sbjct: 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAG--SSVEAAAGADALVEAAMM-GADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGAKISIDSA 213
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PSEU2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=dxr PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.423e-45 Identity = 98/219 (44.75%), Postives = 134/219 (61.19%), Query Frame = 1 Query: 82 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI-----QGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 GP+ IS+LG+TGSIG TLD+VA H ++V AL S + L R PQ V ++ + ++++ LA +L GE G+ E A P V+ IVG AGL+PT+AA+EAGK + LANKE L+ G + ++ +LP DSEH+AIFQC+ +GL +RRI+LTASGG FR+ P+E+L V A HP WSMG+KI+VDSA Sbjct: 3 GPQQISILGATGSIGLSTLDVVARHPALYQVFALTGFSRLDELLALCIRHTPQYAVVPDQVVARKLQDDLAAAGLDTRVLVGEGGLCEVAADPRVDAVMAAIVGAAGLRPTLAAVEAGKKVLLANKEALVMSGALFMQAVRQNGAVLLPIDSEHNAIFQCLPGDFARGLGAVGVRRIMLTASGGPFRETPLEQLHNVTPEQACAHPVWSMGRKISVDSA 221 The following BLAST results are available for this feature:
BLAST of FC876264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876264 ID=FC876264; Name=FC876264; organism=Citrus clementina; type=EST; length=723bpback to top |