FC876264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SYNS9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9902) GN=dxr PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.385e-64 Identity = 133/230 (57.83%), Postives = 162/230 (70.43%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK------PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ------------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K ISVLGSTGSIGTQTL IV + D+FRVVAL AG N+ LL +Q++R +P++VA+ +E+LL E+K+ L ++ PE++ G G+ AA A VVTGIVGCAGL PT+AA+ AGKD+ALANKETLIA GP VLP K ++LPADSEHSAIFQC+Q G+P LRRI LTASGGAFRDW L++ VADA HPNWSMG+KITVDSA Sbjct: 2 KAISVLGSTGSIGTQTLQIVDDFPDQFRVVALTAGRNLALLVEQIQRHQPELVALADEALLPELKQRLEALDPSDRPAQCPEMVGGPDGLEVAASWGSAELVVTGIVGCAGLLPTLAAVRAGKDLALANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQGTPWADTARLSTGVPTPGLRRIQLTASGGAFRDWNAADLEKATVADATSHPNWSMGRKITVDSA 231
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SYNSC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9605) GN=dxr PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 133/228 (58.33%), Postives = 159/228 (69.74%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV----EEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ------------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K ISVLGSTGSIGTQTL I E ++FRVVAL AG N+ LL +QV+R +P+VVA+ + LL E++E L + + P+++ G G+ AA A VVTGIVGCAGL PT+AAI AGKD+ALANKETLIA GP VLP K ++LPADSEHSAIFQC+Q G+P LRRI LTASGGAFRDW L++ VADA HPNWSMG+KITVDSA Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPEQFRVVALTAGRNLKLLVEQVQRHRPEVVALADSDLLPELQERLKDAGVTGADAPQLVGGADGLNVAAAWDSADLVVTGIVGCAGLLPTLAAIRAGKDLALANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQGTPWAENARLSTGVPTPGLRRIQLTASGGAFRDWTAADLEKATVADATSHPNWSMGRKITVDSA 229
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PROMP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dxr PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 129/222 (58.11%), Postives = 159/222 (71.62%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN--VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE------------GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LGSTGSIGTQTL+IV+E DKF+VVAL+AG NI LL +QV + KP+V+A+ +E+LL ++K + N + P +L G + + A A TV+TGIVGCAGL PT++AI+AGK+IALANKETLIA G V+P + ++LPADSEHSAIFQCIQGLP L+ I LTASGGAFRDW VE LK V V DA HPNWSMG+KITVDSA Sbjct: 1 MLGSTGSIGTQTLEIVSELPDKFKVVALSAGRNIDLLTEQVSQHKPEVIAIEDENLLTDLKNNINNLGISNPPIVLGGREAINSVAAWDSADTVITGIVGCAGLIPTMSAIKAGKNIALANKETLIAAGSVVIPALKESKSRLLPADSEHSAIFQCIQGLPNYENADFSTGQIPNGLKAIHLTASGGAFRDWEVEDLKNVTVEDATSHPNWSMGRKITVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SYNS3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9311) GN=dxr PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.184e-63 Identity = 133/230 (57.83%), Postives = 161/230 (70.00%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV------EEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ------------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K ISVLGSTGSIGTQTL IV + D+FRVVAL+AG N++LL Q++R +P VVA+ +++LL E+K+ L + E P ++ G +G+ A A VVTGIVGCAGL PT+AAI AGKD+A+ANKETLIA GP VLP K ++LPADSEHSAIFQC+Q G+P LRRI LTASGGAFRDW L++ VADA HPNWSMGKKITVDSA Sbjct: 2 KAISVLGSTGSIGTQTLAIVEDFPDQFRVVALSAGRNLSLLVSQIQRHRPDVVALADQALLAELKDRLMALPADTRPEPLPHLVGGPEGLDVVASWDSADLVVTGIVGCAGLLPTLAAIRAGKDLAVANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQGTPWSDTARLSTGVPTPGLRRIQLTASGGAFRDWSAADLEKATVADATSHPNWSMGKKITVDSA 231
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PROM5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9515) GN=dxr PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.546e-63 Identity = 130/226 (57.52%), Postives = 161/226 (71.24%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN--VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE------------GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K I+VLGSTGSIGTQTL+IV E +KF+VVAL+AG NI LL +QV + KP+V+A+ +E+LL ++K + N + P +L G + + A A TV+TGIVGCAGL PT++AI+A K+IALANKETLIA G V+P ++ ++LPADSEHSAIFQCIQGLP L+ I LTASGGAFRDW VE LK V V DA HPNWSMG+KITVDSA Sbjct: 2 KYITVLGSTGSIGTQTLEIVRELPNKFKVVALSAGRNIDLLTEQVSQHKPEVIAIDDENLLTDLKNNINNLGISNPPIVLGGREAINSVAAWDSADTVITGIVGCAGLIPTMSAIKASKNIALANKETLIAAGSVVIPALKENKSRLLPADSEHSAIFQCIQGLPNYENADFVTGQIPNGLKAIHLTASGGAFRDWAVEDLKNVTVEDATSHPNWSMGRKITVDSA 227
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SYNPX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain WH8102) GN=dxr PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.309e-62 Identity = 128/223 (57.40%), Postives = 156/223 (69.96%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE---ALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ------------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LGSTGSIGTQTL I E ++FRVVAL AG N+ LL Q++R +P++VA+ N LL E+++ AL ++P+++ G G+ AA A VVTGIVGCAGL PT+AA+ AGKD+ALANKETLIA GP VLP K ++LPADSEHSAIFQC+Q G+P LRRI LTASGGAFRDW E L+ VADA HPNWSMG+KITVDSA Sbjct: 1 MLGSTGSIGTQTLQIAEEFPEQFRVVALTAGQNLDLLVQQIQRHQPELVALANADLLPELQQRLDALGTDRKRPQLVGGPDGLNIAASWESADLVVTGIVGCAGLLPTLAAVRAGKDLALANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQGTPWAENARLSTGVPTPGLRRIQLTASGGAFRDWKAEDLENATVADATSHPNWSMGRKITVDSA 223
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PROM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL1A) GN=dxr PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.232e-62 Identity = 129/230 (56.09%), Postives = 158/230 (68.70%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE------KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ------------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K ISVLGSTGSIGTQTL I E D+F++VAL AG N+ L+ Q++ +P+VV++ +ESLL E+ + ++ E KP ++AG +G+ AA A VVTGIVGCAGL PT+AAIEAGKD+ALANKETLIA GP V+P K ++LPADSEHSAIFQC+Q G+P + I LTASGGAFRDW E L + V DA HPNWSMGKKITVDSA Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPDQFKIVALTAGKNLDLVTKQIETHQPEVVSLADESLLPELTRRINSLNEDSKILKKPLLMAGAEGLNTAAAWGSADLVVTGIVGCAGLLPTLAAIEAGKDLALANKETLIAAGPVVIPALKKSGSRLLPADSEHSAIFQCLQGTPWADNARLSTGVPTPGFKSIQLTASGGAFRDWKAEDLVKATVEDATSHPNWSMGKKITVDSA 231
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PROMT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL2A) GN=dxr PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.973e-62 Identity = 128/230 (55.65%), Postives = 158/230 (68.70%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE------KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ------------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K ISVLGSTGSIGTQTL I E ++F++VAL AG N+ L+ Q++ +P+VV++ +ESLL E+ + ++ E KP ++AG +G+ AA A VVTGIVGCAGL PT+AAIEAGKD+ALANKETLIA GP V+P K ++LPADSEHSAIFQC+Q G+P + I LTASGGAFRDW E L + V DA HPNWSMGKKITVDSA Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPEQFKIVALTAGKNLDLVIKQIETHQPEVVSLADESLLSELSSRINSLTENKKIVKKPLLMAGAEGLNTAAAWGSADLVVTGIVGCAGLLPTLAAIEAGKDLALANKETLIAAGPVVIPALKKSGSRLLPADSEHSAIFQCLQGTPWADNARLSTGMPTPGFKSIQLTASGGAFRDWKAEDLVKATVEDATSHPNWSMGKKITVDSA 231
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_GEOUR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter uraniireducens (strain Rf4) GN=dxr PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 121/212 (57.08%), Postives = 153/212 (72.17%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K +++LGSTGSIG TLDIVA H DKF+VVAL AG N+ LL Q++ F PQ+VAV NE L ++++ L+ + P IL G +G+I AA DA VV IVG AGL PT AAI+AGKDIALANKETL+ G ++ + H +K+ P DSEHSA+FQ +QG +++IILTASGG F WP EKL +V V+DAL HPNWSMG+KIT+DSA Sbjct: 2 KKLAILGSTGSIGVSTLDIVAAHPDKFQVVALTAGGNLDLLKKQIEEFSPQLVAVLNEELAQKLQQMLSG--KGPAILHGVEGMIAAATAADADMVVAAIVGAAGLVPTAAAIKAGKDIALANKETLVTAGRLIMDMVKAHGVKLYPVDSEHSAVFQSLQGHRMEDVKQIILTASGGPFFTWPAEKLAQVTVSDALNHPNWSMGQKITIDSA 211
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PROMM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9313) GN=dxr PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.468e-61 Identity = 125/226 (55.31%), Postives = 161/226 (71.24%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK------PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ------------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LGSTGSIGTQTL+I E ++FRVVAL AG+N++L+ +Q++R P+VVA+ + SLL E+K+ L + + P++LAG +G+ AA A VV+GIVGCAGL PT+AAI+AGKD+ALANKETLIA P VLP + ++LPADSEHSAIFQC+Q G+P LR I LTASGGAFRDW + L++ +ADA HPNWSMG+KITVDSA Sbjct: 1 MLGSTGSIGTQTLEIAEEFPERFRVVALTAGTNVSLVVEQIQRHHPEVVALADASLLPELKQQLNALPSEQQPPHLPQLLAGPEGLNVAASWDSADLVVSGIVGCAGLLPTLAAIKAGKDLALANKETLIAAAPVVLPELKRSGSRLLPADSEHSAIFQCLQGTPWAENARLSTGVPTPGLRHIQLTASGGAFRDWSAKDLEKATIADATSHPNWSMGRKITVDSA 226 The following BLAST results are available for this feature:
BLAST of FC876264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876264 ID=FC876264; Name=FC876264; organism=Citrus clementina; type=EST; length=723bpback to top |