FC876264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_WOLSU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Wolinella succinogenes GN=dxr PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.104e-36 Identity = 85/208 (40.87%), Postives = 128/208 (61.54%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LGSTGSIG L + + + V L AG N++LL Q+ F+P+++ + + S E+ ++ + ++L GE+G+IE+ + V+ +VG GL+PT+ ++ GK +ALANKE+L+AGG FV KI+P DSEH +++ P R+ +TASGGAFRD P+E++ K AL+HPNWSMG+KITVDSA Sbjct: 3 LLGSTGSIGQNALSLARDF--RLPVEVLVAGHNLSLLNAQIAEFQPKIIVIADSSRASEL-----SLPKDSKLLFGEEGIIESLHLAQSSFVLNALVGFLGLRPTLESLRLGKTLALANKESLVAGGSFV------DASKIIPVDSEHFSLWFLKSDKP---FSRLFITASGGAFRDTPLEEIPLQKAQAALRHPNWSMGRKITVDSA 194
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CORGB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Corynebacterium glutamicum (strain R) GN=dxr PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.104e-36 Identity = 92/215 (42.79%), Postives = 126/215 (58.60%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRF--KPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K I +LGSTGSIGTQ LD++A++ DKF VV +AAG S L+ Q ++ VAV + + +AL EI++G A TV+ +VG GL T+A +E+G +ALANKE+L+AGG FV A +I+P DSEHSA+ QC++ + RI+LTASGG FR W EK+ EV A HP W+MG+ T++SA Sbjct: 6 KKILILGSTGSIGTQALDVIADNSDKFEVVGIAAGGSQPDLVISQAQQLGLAADKVAVADAQAAAVVSKALGG-----EIISGTDAAKILVETTKADTVLNALVGSLGLAATLATLESGAHLALANKESLVAGGEFVTSKAKLG--QIIPVDSEHSAMAQCLRSGTRDEVARIVLTASGGPFRGWTREKMWEVTPEQAAAHPTWAMGQMNTLNSA 213
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_ANAMM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anaplasma marginale (strain St. Maries) GN=dxr PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.104e-36 Identity = 87/215 (40.47%), Postives = 128/215 (59.53%), Query Frame = 1 Query: 82 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 G K +SV GSTG IG + + I+ ++ D F VVAL A + LLA Q + + V ++ + ++E L E+ AG GV++AA D + V I G A L P + I++G K IALANKE+++ GG ++ A + + I+P DSEH+A+FQ + +G + R+ LTASGG F W E+++ V +DAL HP W MG+KI+VDSA Sbjct: 5 GRKRVSVFGSTGCIGQKAVQILRDNPDDFEVVALVAKQDAHLLASQARLLSANMAVVAEDAAYETLRELLRGT--CVEVGAGTAGVMDAASR-DVDSAVMAITGIAALHPVIRLIKSGVKSIALANKESVVCGGELLINAAKQTGVNIVPVDSEHNAVFQILAH--DGCVARVTLTASGGPFLRWTREQMQAVTPSDALAHPVWKMGRKISVDSA 214
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_ANAMF (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anaplasma marginale (strain Florida) GN=dxr PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.104e-36 Identity = 87/215 (40.47%), Postives = 128/215 (59.53%), Query Frame = 1 Query: 82 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 G K +SV GSTG IG + + I+ ++ D F VVAL A + LLA Q + + V ++ + ++E L E+ AG GV++AA D + V I G A L P + I++G K IALANKE+++ GG ++ A + + I+P DSEH+A+FQ + +G + R+ LTASGG F W E+++ V +DAL HP W MG+KI+VDSA Sbjct: 5 GRKRVSVFGSTGCIGQKAVQILRDNPDDFEVVALVAKQDAHLLASQARLLSANMAVVAEDAAYETLRELLRGT--CVEVGAGTAGVMDAASR-DVDSAVMAITGIAALHPVIRLIKSGVKSIALANKESVVCGGELLINAAKQTGVNIVPVDSEHNAVFQILAH--DGCVARVTLTASGGPFLRWTREQMQAVTPSDALAHPVWKMGRKISVDSA 214
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHEWM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=dxr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.748e-36 Identity = 84/218 (38.53%), Postives = 125/218 (57.34%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG TL ++A + + + V AL A +N+ + ++++P+V + +E ++E L+ K E+ GE + TV+ IVG AGL PT+AA++AGK + LANKE+L+ G + K ++LP DSEH+AIFQ + L E + I+LT SGG F P+ L ++ A A KHPNWSMG+KI+VDSA Sbjct: 6 ILGATGSIGASTLSVIASNPETYSVYALVANTNVDKMMALCEQYRPKVAHMVDEQAAKSLQERLSP-SLKIEVTTGESQLESIVTSSCVDTVMAAIVGAAGLVPTLAAVKAGKRVLLANKESLVMSGRLFIEEMKKSGAQVLPVDSEHNAIFQALPEPVQQEIGFCDLDEAGISHILLTGSGGPFLTSPLSSLPQMTPAQACKHPNWSMGRKISVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_NAUPA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=dxr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.748e-36 Identity = 86/213 (40.38%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIF-----QCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 VLGSTGSIG TL+I ++ + L AG+N +L Q+K FKP+ V V++ ++I + P + GE+ V++ + +V +VG AGL+PT+ A E GK IALANKE+L+ G F+ KI P DSEH ++ +C + ++++ +TASGGA RDW +E +K+ + D LKHPNWSMG KIT+DSA Sbjct: 3 VLGSTGSIGVNTLEIARRYD--IEIEGLVAGNNYEVLNAQIKEFKPKYVVVKDLKTAEKI--------DFPNVKYGEEAVLDMIEKSKSDLIVNALVGDAGLRPTLKAQECGKKIALANKESLVNAGKFI------DTSKITPIDSEHFGLWYLLIEKCRVKSEKCNVKKLYITASGGALRDWSLEDIKKATLKDVLKHPNWSMGVKITIDSA 199
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_MYCPA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium paratuberculosis GN=dxr PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.748e-36 Identity = 92/212 (43.40%), Postives = 127/212 (59.91%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNI-TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + VLGSTGSIGTQ L ++A + D+F VV LAAG +N+ TLL + + V N ++ DE A + P G + +A V+ +VG GL+PT+AA+E+G +ALANKE+LIAGGP VL A +I+P DSEHSA+ QC++G + +++LTASGG FR W E+L+ V A HP WSMG T++SA Sbjct: 16 VLVLGSTGSIGTQALQVIAANPDRFEVVGLAAGGANLDTLLRQRAE------TGVTNVAVADE--HAARRAGDIP--FCGPEAATRLVEETEADVVLNALVGALGLRPTLAALESGARLALANKESLIAGGPLVLAAAAPG--QIVPVDSEHSALAQCLRGGTGDEVAKLVLTASGGPFRGWTAEELEHVTPEQAGAHPTWSMGPMNTLNSA 215
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_MYCA1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium avium (strain 104) GN=dxr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.748e-36 Identity = 92/212 (43.40%), Postives = 127/212 (59.91%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNI-TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + VLGSTGSIGTQ L ++A + D+F VV LAAG +N+ TLL + + V N ++ DE A + P G + +A V+ +VG GL+PT+AA+E+G +ALANKE+LIAGGP VL A +I+P DSEHSA+ QC++G + +++LTASGG FR W E+L+ V A HP WSMG T++SA Sbjct: 16 VLVLGSTGSIGTQALQVIAANPDRFEVVGLAAGGANLDTLLRQRAE------TGVTNVAVADE--HAARRAGDIP--FCGPEAATRLVEETEADVVLNALVGALGLRPTLAALESGARLALANKESLIAGGPLVLAAAAPG--QIVPVDSEHSALAQCLRGGTGDEVAKLVLTASGGPFRGWTAEELEHVTPEQAGAHPTWSMGPMNTLNSA 215
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_XANOP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=dxr PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.589e-36 Identity = 86/213 (40.38%), Postives = 120/213 (56.34%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEG-ALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + ++V G+TGSIG LD++A H ++ R L+AGS + L +P + + +L +++ L + + AG + + A TVV IVG AGL T+AA AGK + LANKE+L+ G + A +I+P DSEHSAIFQC++ G +RR+ILTASGG FR L V A A+ HP WSMG KI+VDSA Sbjct: 7 RQVAVFGATGSIGASALDVIARHPERLRASVLSAGSKVEDLLALCAAHRPAHAVIADAALYPALRDGLRALGLATQAHAGAEALDALAGSDACDTVVAAIVGAAGLPSTLAAARAGKRLLLANKESLVLAGELLTRTATAAGAEIIPIDSEHSAIFQCLRSCDAGRGVRRVILTASGGPFRGRDRAALAAVTPAQAVAHPKWSMGPKISVDSA 219
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_MYCUA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium ulcerans (strain Agy99) GN=dxr PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.589e-36 Identity = 98/226 (43.36%), Postives = 132/226 (58.41%), Query Frame = 1 Query: 79 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVT----------VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 DG + VLGSTGSIGTQ L+++A + D+F VV LAAG SN+ L Q R E+ + EI A +E+ LAG+ A + PDAVT V+ +VG GL+PT+AA+ +G +ALANKE+L+AGGP VL A +I+P DSEHSA+ QC++ + +++LTASGG FR W L+EV A HP WSMG T++SA Sbjct: 10 DGRLRVLVLGSTGSIGTQALEVIAANPDRFEVVGLAAGGSNLDTLRRQ-----------RAETGVTEI----AIADERAAQLAGDI----AYQEPDAVTRLVEETEADVVLNALVGALGLRPTLAALASGARLALANKESLVAGGPLVLQAAQPG--QIVPVDSEHSALAQCLRAGTPDEVAKLVLTASGGPFRGWSAADLQEVTPEQAGAHPTWSMGPMNTLNSA 214 The following BLAST results are available for this feature:
BLAST of FC876264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876264 ID=FC876264; Name=FC876264; organism=Citrus clementina; type=EST; length=723bpback to top |