FC876264

Overview
NameFC876264
Unique NameFC876264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15084 contig Ccv1_Contig15084:326..1048. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_GEOSF (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter sp. (strain FRC-32) GN=dxr PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.073e-56
Identity = 115/212 (54.25%), Postives = 149/212 (70.28%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K +++LGSTGSIG  TL+IVA H +KF+++AL AG NI LL +Q+  F PQ+VAV+NE L  +++  L+    K  ++ G +G+I AA   D   VV  IVG AGL PT AAIEAGKDIALANKETL+  G  ++ +     +K+ P DSEHSA+FQ +QG  +  +RRIILTASGG F +   EKL +V V DAL HPNWSMG+KIT+DSA
Sbjct:    2 KNLTILGSTGSIGVSTLEIVAAHPEKFKIIALTAGENIDLLKEQIDAFAPQLVAVKNEELALKLEGMLSC--RKTAVMYGVEGMIAAATASDTNMVVAAIVGAAGLLPTSAAIEAGKDIALANKETLVTAGRLIMDMVKTRGVKLYPVDSEHSAVFQSLQGHRKEDVRRIILTASGGPFLNLSGEKLAQVTVKDALNHPNWSMGQKITIDSA 211          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_GEOSW (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacillus sp. (strain WCH70) GN=dxr PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.402e-56
Identity = 111/212 (52.36%), Postives = 148/212 (69.81%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG++GSIGTQTLDI+  H D+F++ A++ G N+ +    ++ F P++VAV      ++++   A    K +I+ GE+G+IEAA  P+   VVT +VG  GL PT+ AIEAGK IALANKETL+  G  V   A KH + +LP DSEHSAIFQC+QG     + +IILTASGG+FRD   E+LK V V +AL+HPNWSMG KIT+DSA
Sbjct:    2 KYISILGASGSIGTQTLDIIRSHPDEFQLTAISIGKNVDMARAIIEEFAPRLVAVAEADAYEKLRSEYAG---KVKIVFGEEGLIEAAAFPETDIVVTAVVGSVGLVPTLRAIEAGKTIALANKETLVTAGHIVTAAAKKHGVSLLPVDSEHSAIFQCLQGEKRNRVEKIILTASGGSFRDKTREELKNVTVEEALRHPNWSMGAKITIDSA 210          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_EUBE2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=dxr PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.830e-56
Identity = 112/212 (52.83%), Postives = 154/212 (72.64%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K +S+LGSTGSIGTQTLD++  + D   VVALAAG+ ++ LA+QV+ FKPQ+V +  E L+ E+K  + +++ K  I++G++G+IEAA    A  VVT +VG  G+ PTV AI+A KDIALANKETL+  G  ++ LA + N+ I P DSEHSAIFQC+ G   G + +I+LTASGG FR      L+ V++ DALKHPNW+MG+KIT+DS+
Sbjct:    2 KNVSILGSTGSIGTQTLDVIRRNAD-INVVALAAGTRVSDLAEQVREFKPQLVCIGKEELVPELKTLIGDMDVK--IVSGDEGLIEAATIESAEIVVTAVVGMMGITPTVEAIKAHKDIALANKETLVCAGHIIMSLAKECNVNIYPVDSEHSAIFQCLNGERRGEIEKILLTASGGPFRGKKRADLENVQLEDALKHPNWAMGRKITIDSS 210          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_BACCQ (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain Q1) GN=dxr PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.830e-56
Identity = 111/212 (52.36%), Postives = 147/212 (69.34%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG++GSIGTQTLD++  H D+FR+VA +AG NI      ++ F PQ+V+V+ E   D +K  L  V    +++ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD   ++L  V V DAL+HPNWSMG KIT+DSA
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSAGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKVVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSA 209          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR2_BACCR (1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dxr2 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.830e-56
Identity = 111/212 (52.36%), Postives = 147/212 (69.34%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L +V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD   ++L  V V DAL+HPNWSMG KIT+DSA
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQSVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSA 209          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_BACC7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain AH187) GN=dxr PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.078e-56
Identity = 111/212 (52.36%), Postives = 146/212 (68.87%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD   ++L  V V DAL+HPNWSMG KIT+DSA
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSA 209          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_BACC3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain 03BB102) GN=dxr PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.078e-56
Identity = 111/212 (52.36%), Postives = 146/212 (68.87%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD   ++L  V V DAL+HPNWSMG KIT+DSA
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSA 209          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_BACC1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain ATCC 10987) GN=dxr PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.078e-56
Identity = 111/212 (52.36%), Postives = 146/212 (68.87%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD   ++L  V V DAL+HPNWSMG KIT+DSA
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSA 209          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR2_BACHK (1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 OS=Bacillus thuringiensis subsp. konkukian GN=dxr2 PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.078e-56
Identity = 111/212 (52.36%), Postives = 146/212 (68.87%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD   ++L  V V DAL+HPNWSMG KIT+DSA
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGNEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSA 209          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR2_BACCZ (1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 OS=Bacillus cereus (strain ZK / E33L) GN=dxr2 PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.078e-56
Identity = 111/212 (52.36%), Postives = 146/212 (68.87%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD   ++L  V V DAL+HPNWSMG KIT+DSA
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSA 209          
The following BLAST results are available for this feature:
BLAST of FC876264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 441
Match NameE-valueIdentityDescription
DXR_GEOSF1.073e-5654.251-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_GEOSW1.402e-5652.361-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_EUBE21.830e-5652.831-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_BACCQ1.830e-5652.361-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR2_BACCR1.830e-5652.361-deoxy-D-xylulose 5-phosphate reductoisomerase 2 ... [more]
DXR_BACC74.078e-5652.361-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_BACC34.078e-5652.361-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_BACC14.078e-5652.361-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR2_BACHK4.078e-5652.361-deoxy-D-xylulose 5-phosphate reductoisomerase 2 ... [more]
DXR2_BACCZ4.078e-5652.361-deoxy-D-xylulose 5-phosphate reductoisomerase 2 ... [more]

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Properties
Property NameValue
Genbank descriptionC32002F01EF DevOvary1 Citrus clementina cDNA clone C32002F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876264 ID=FC876264; Name=FC876264; organism=Citrus clementina; type=EST; length=723bp
ATAGTTCAATGTTCTGCTCAGGGACCTCCTCCTGCATGGCCAGGCCGAGC
TGTTACAGAGACTTTTCGTAAGACTTGGGATGGTCCAAAGCCAATCTCAG
TGCTTGGGTCAACTGGTTCTATTGGAACTCAGACGTTGGACATAGTTGCG
GAGCATGAAGATAAATTCAGAGTTGTGGCACTGGCAGCTGGTTCAAATAT
AACTCTTCTTGCTGATCAGGTGAAGAGATTCAAACCTCAAGTAGTTGCTG
TTAGAAATGAGTCATTACTTGATGAAATCAAGGAGGCTTTGGCTAATGTT
GAAGAAAAGCCCGAGATTTTGGCCGGGGAACAGGGAGTCATTGAGGCTGC
CCGACACCCAGATGCTGTCACCGTGGTGACAGGTATAGTCGGTTGTGCAG
GATTAAAGCCTACAGTTGCTGCGATAGAAGCAGGAAAAGATATAGCTTTG
GCCAATAAGGAGACATTGATTGCTGGTGGTCCTTTTGTCCTTCCTCTAGC
TCACAAGCATAACATAAAAATTCTTCCAGCTGATTCAGAACATTCTGCCA
TATTTCAGTGTATTCAAGGCTTGCCTGAGGGTGCACTTCGGCGCATTATT
TTAACTGCATCTGGTGGGGCTTTCAGGGACTGGCCGGTTGAGAAACTGAA
AGAAGTTAAAGTGGCTGATGCATTGAAGCATCCTAACTGGAGTATGGGAA
AAAAGATTACTGTCGATTCTGCT
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