FC876264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHEPA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=dxr PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.177e-33 Identity = 79/218 (36.24%), Postives = 121/218 (55.50%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG TL++VA + ++++V AL A +N+ + + +P++ + + +K+ L + K E+ GE ++ + TV+ IVG AGL T+AA+ AGK + LANKE+L+ G + ++LP DSEH+AIFQC+ L + I+LT SGG F + L + A KHPNWSMG+KI+VDSA Sbjct: 6 ILGATGSIGASTLNVVACNPEQYKVFALVANTNVAKMLEICIAHQPKIAHMVDAKAAQALKQQLPS-HLKIEVTTGEDELLSLVSCSEVDTVMAAIVGAAGLPSTLAAVNAGKRVLLANKESLVMSGQLFIEAMQNSGAQVLPVDSEHNAIFQCLSERSQLEIGRCDLTGAGVSHILLTGSGGPFLTSDLSSLVNMTPDQACKHPNWSMGRKISVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_RHOBA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhodopirellula baltica GN=dxr PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.177e-33 Identity = 95/270 (35.19%), Postives = 135/270 (50.00%), Query Frame = 1 Query: 64 FRKTWDGPKPISVLGSTGSIGTQTLDIV-----AEHEDKFRVVALAAGSNITLLADQVK--RFKPQVVAVRNESLLDEIKEAL--------ANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI--------------QGL-PEGA--------------------LRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 FR T ++VLG+TGSIG LD++ + + + V +++ S I L + P+ V V + + + +AL + + E+ + G ++ AA D VV IVG AGL+ T+AA+ AGK +ALANKETL+ GP V A + ++LP DSEHSAIFQC+ Q + PE +RR+ILTASGG FRDW +++E + AL HP W MG KIT+DSA Sbjct: 14 FRSTNRPVSRVAVLGATGSIGVAALDVIENLNRCDPDFAWEVSSMSGHSQIDPLIELAGGCHTPPKCVVVSDAEMEAQAAKALRTASTQTSSRLTERCRLDVGPDALVRAATENDVDVVVAAIVGRAGLESTLAAVHAGKRVALANKETLVVAGPVVTRAAANNGAQLLPVDSEHSAIFQCLAESRARQSQYATAKQSIQPESVRATDPPSSTTDSPAKTHWPGVRRLILTASGGPFRDWTTAQMREATIEQALAHPTWKMGAKITIDSA 283
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PERMH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=dxr PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.177e-33 Identity = 87/212 (41.04%), Postives = 118/212 (55.66%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K ++VLGSTGSIGTQTLDIV ++ D+ V LAA L DQ+ FKP+ V + + +K L GE G+ + A+ D + GI G G+ PT +E K +A ANKE +I G K++ I P DSEHSAIFQC+ + + +IILTASGG F + P E+ + + AL HP W MGKK+++DSA Sbjct: 2 KRLAVLGSTGSIGTQTLDIVRKYRDRLEVSLLAASRVSEKLLDQIDEFKPEYVYIAEGEKIKGVKT-----------LIGEDGLYKLAQL-DIDLFINGISGINGILPTYLLLENNKKLATANKEAIICLGEIY---GDKYS-DIFPIDSEHSAIFQCLLSGRKEEVEKIILTASGGPFLNLPKEEFRYITPDQALNHPRWKMGKKVSIDSA 197
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CAMJR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Campylobacter jejuni (strain RM1221) GN=dxr PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.177e-33 Identity = 83/208 (39.90%), Postives = 120/208 (57.69%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + GSTGSIG L + A + ALA G NI LL +Q+ RFKP+ VA+++ +K + G++G+ + ++ IVG AGLK T+ A E GK+IALANKE+L+ G F+ K LP DSEH+A+ ++G + ++ +TASGGAF + ++ L +V + DALKHPNW+MG KIT+DSA Sbjct: 3 LFGSTGSIGVNALKLAALKN--IPISALACGDNIALLNEQIARFKPKFVAIKDSKNKHLVKH--------DRVFIGQEGLEQILTECQDKLLLNAIVGFAGLKSTLKAKELGKNIALANKESLVVAGSFL------KGAKFLPVDSEHAALKFLLEGKKN--IAKLYITASGGAFYKYKIKDLNQVSLKDALKHPNWNMGAKITIDSA 192
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CAMJE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Campylobacter jejuni GN=dxr PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.844e-33 Identity = 83/208 (39.90%), Postives = 120/208 (57.69%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + GSTGSIG L + A + ALA G NI LL +Q+ RFKP+ V++++ +K + G++G+ + ++ IVG AGLK T+ A E GK+IALANKE+L+ G F+ K LP DSEH+A+ ++G + ++ +TASGGAF + ++ L +V V DALKHPNW+MG KIT+DSA Sbjct: 3 LFGSTGSIGVNALKLAALKN--IPISALACGDNIALLNEQIARFKPKFVSIKDSKNKHLVKH--------DRVFIGQEGLEQILTECQDKLLLNAIVGFAGLKSTLKAKELGKNIALANKESLVVAGSFL------KGAKFLPVDSEHAALKFLLEGKKN--IAKLYITASGGAFYRYKIKDLNQVSVKDALKHPNWNMGAKITIDSA 192
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_THENN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dxr PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.714e-33 Identity = 88/212 (41.51%), Postives = 129/212 (60.85%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + + +LG TGSIGTQTLD++ + E R+V ++ +N+ L VK F+ + V V D E A V + P L + ++EA + PD V + G +GL+ +AA+E + + LANKE+L+ GG V + +++++P DSEHSAIFQ I E +++I+LTASGGA RDW +EK++ D LKHP WSMG +ITVDSA Sbjct: 4 RTLVILGVTGSIGTQTLDVLRKIEG-IRLVGISFHTNVELAKKIVKEFQVENVVVTG----DVSFECSAKVWKGPHAL---EDMMEALK-PDITMVA--VSGFSGLRAVLAALEHSRRVCLANKESLVCGGFLVKRKLKEKSVELIPVDSEHSAIFQVI----EPDVQKIVLTASGGALRDWDLEKIETATPNDVLKHPVWSMGARITVDSA 200
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_MYCLE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium leprae GN=dxr PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.714e-33 Identity = 88/212 (41.51%), Postives = 120/212 (56.60%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI--TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + VLGSTGSIGTQ L+++A + D+F VV LAAG TLL + V N ++ D+ LA + P G V +A V+ +VG GL+PT+AA+ G +ALANKE+L+AGG VL A +I+P DSEHSA+ QC++G + +++LTASGG FR W L+ V A HP WSMG T++SA Sbjct: 15 VLVLGSTGSIGTQALEVIAANPDRFEVVGLAAGGAQLDTLLRQRA------ATGVTNIAIADDRAAQLAG--DIP--YHGTDAVTRLVEETEADVVLNALVGALGLRPTLAALHTGARLALANKESLVAGGSLVLAAAQPG--QIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGGPFRGWNAGDLERVTPEQAGVHPTWSMGTMNTLNSA 214
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_MYCLB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium leprae (strain Br4923) GN=dxr PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.714e-33 Identity = 88/212 (41.51%), Postives = 120/212 (56.60%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI--TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + VLGSTGSIGTQ L+++A + D+F VV LAAG TLL + V N ++ D+ LA + P G V +A V+ +VG GL+PT+AA+ G +ALANKE+L+AGG VL A +I+P DSEHSA+ QC++G + +++LTASGG FR W L+ V A HP WSMG T++SA Sbjct: 15 VLVLGSTGSIGTQALEVIAANPDRFEVVGLAAGGAQLDTLLRQRA------ATGVTNIAIADDRAAQLAG--DIP--YHGTDAVTRLVEETEADVVLNALVGALGLRPTLAALHTGARLALANKESLVAGGSLVLAAAQPG--QIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGGPFRGWNAGDLERVTPEQAGVHPTWSMGTMNTLNSA 214
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_AQUAE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Aquifex aeolicus GN=dxr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.851e-33 Identity = 76/210 (36.19%), Postives = 123/210 (58.57%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + VLGSTGS+G+QTL + D+ +V + A L Q K++KP+ V S + KE L ++ E + L G++G+ A ++ ++ I G G+KP I+AGK + +NKE+++ G + K+ +++P DSEH+A+FQ + + ++ + LTASGG F+D +E+LK V +AL+HP W+MG KIT+DSA Sbjct: 3 LGVLGSTGSVGSQTLQVYENFRDEIELVGILANRASEKLLQQAKKYKPKYVV----SYQEPAKEWLESLPEGVKYLKGDEGL--KAIIEESERLMNAISGIYGIKPAYEVIKAGKTLLASNKESILCLGEII----RKNRERVIPVDSEHNALFQLLSSVKREEVKHVYLTASGGPFKDKSLEELKTASVEEALRHPRWNMGAKITIDSA 202
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHEON (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella oneidensis GN=dxr PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.335e-33 Identity = 84/223 (37.67%), Postives = 118/223 (52.91%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP-----EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG TL +++ + +RV AL A +++ + +PQV + + K ALA + P ++ +GE +I P TV+ IVG AGL PT+AA++AGK + LANKE L+ G + +LP DSEH+AIFQC+ L + I+LT SGG F + L + A A KHPNWSMG KI+VDSA Sbjct: 6 ILGATGSIGASTLSVISANPTAYRVYALVANASVDKMLTLCLAHRPQVAHMVDH------KAALALKAQLPAALNIQVTSGEDELIALVTAPAVDTVMAAIVGAAGLVPTLAAVKAGKRVLLANKEALVMSGELFIEATRASGATLLPVDSEHNAIFQCLPEEVQSNLGRCDLAASGISHILLTGSGGPFLTAELSNLAAMTPAQACKHPNWSMGPKISVDSA 222 The following BLAST results are available for this feature:
BLAST of FC876264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876264 ID=FC876264; Name=FC876264; organism=Citrus clementina; type=EST; length=723bpback to top |