FC876264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHESA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella sp. (strain ANA-3) GN=dxr PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.274e-33 Identity = 81/218 (37.16%), Postives = 117/218 (53.67%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG TL +++ + D +RV AL A +++ + +PQV + + ++ L E ++ +GE +I + TV+ IVG AGL PT+AA++AGK + LANKE L+ G + +LP DSEH+AIFQC+ L + I+LT SGG F + L + A A KHPNWSMG KI+VDSA Sbjct: 6 ILGATGSIGASTLSVISANPDAYRVYALVANASVDKMLALCVTHRPQVAHMVDSQAALALQAKLPP-ELNIQVTSGEDELIALVTATEVDTVMAAIVGAAGLVPTLAAVKAGKRVLLANKEALVMSGELFIEATKASGATLLPVDSEHNAIFQCLPEEVQANLGRCDLAASGISHILLTGSGGPFLTAELASLASMTPAQACKHPNWSMGPKISVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHESR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella sp. (strain MR-7) GN=dxr PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.411e-32 Identity = 81/218 (37.16%), Postives = 117/218 (53.67%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG TL +++ + D +RV AL A +++ + +PQV + + ++ L E ++ +GE +I + TV+ IVG AGL PT+AA++AGK + LANKE L+ G + +LP DSEH+AIFQC+ L + I+LT SGG F + L + A A KHPNWSMG KI+VDSA Sbjct: 6 ILGATGSIGASTLSVISANPDAYRVYALVANASVDKMLALCVTHRPQVAHMVDSQAALALQAKLPP-ELNIQVSSGEDELIALVTATEVDTVMAAIVGAAGLVPTLAAVKAGKRVLLANKEALVMSGELFIEATKASGATLLPVDSEHNAIFQCLPEEVQANLGRCDLAASGISHILLTGSGGPFLTAELASLAAMTPAQACKHPNWSMGPKISVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHESM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella sp. (strain MR-4) GN=dxr PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.843e-32 Identity = 81/218 (37.16%), Postives = 117/218 (53.67%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG TL +++ + D +RV AL A +++ + +PQV + + ++ L E ++ +GE +I + TV+ IVG AGL PT+AA++AGK + LANKE L+ G + +LP DSEH+AIFQC+ L + I+LT SGG F + L + A A KHPNWSMG KI+VDSA Sbjct: 6 ILGATGSIGASTLSVISANPDAYRVYALVANASVDKMLALCITHRPQVAHMVDSQAALALQAKLPP-ELNIQVSSGEDELIALVTATEVDTVMAAIVGAAGLVPTLAAVKAGKRVLLANKEALVMSGELFIEATKASGATLLPVDSEHNAIFQCLPEEVQANLGRCDLAASGISHILLTGSGGPFLTAELASLAAMTPAQACKHPNWSMGPKISVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHELP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=dxr PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.843e-32 Identity = 76/218 (34.86%), Postives = 118/218 (54.13%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG TL ++ ++ + ++ AL A ++ + D ++ P + + + E++ L + +GE + P+ V+ IVG AGL T+AA++AGK + LANKE+L+ G + N K+LP DSEH+AIFQC+ L + I+LT SGG F ++ L ++ A KHPNWSMG+KI+VDSA Sbjct: 6 ILGATGSIGASTLSVIEQNPEAYKAFALVAHKSVDKMLDLCIKYNPSIAHMVDPQAAAELQRRLP-AHMAIAVSSGEDELAAIVALPEVDCVMAAIVGAAGLPATLAAVKAGKRVLLANKESLVMSGRLFIDAMQGSNAKVLPVDSEHNAIFQCLPEPAQQAIGACDLAGAGISHILLTGSGGPFLTSDLDSLSQMTPDQACKHPNWSMGRKISVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHESH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella sediminis (strain HAW-EB3) GN=dxr PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.407e-32 Identity = 78/218 (35.78%), Postives = 120/218 (55.05%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG+ TL ++ + D + V AL A +++ + + +PQ+ + + +K+ L EI GE +I+ +V+ IVG AGL PT+AA++AGK + LANKE+L+ G + + ++LP DSEH+AI+Q + L + + I+LT SGG F + L + A A KHPNWSMG+KI+VDSA Sbjct: 6 ILGATGSIGSSTLSVIESNPDAYSVYALVANTSVEKMLALCETHRPQIAHMVDGQAAKSLKQRLPT-SLNVEITTGEDQLIDIVSASCVDSVMAAIVGAAGLVPTLAAVKAGKRVLLANKESLVMSGRLFIDEMRRSGARVLPVDSEHNAIYQALPESLQSNIGYCELEKAGVSHILLTGSGGPFLTSELASLASMTPAQACKHPNWSMGRKISVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_THEP1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dxr PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.144e-32 Identity = 82/212 (38.68%), Postives = 131/212 (61.79%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + + +LG+TGSIGTQTLD++ + + R++ ++ SN+ L VK F + VAV + E +++ NV + P + + ++EA + PD V + G +GL+ ++++E K + LANKE+L+ GG V + +++P DSEHSAIFQ I+ PE + +++LTASGGA RDW + K+ + D L+HP W+MG +ITVDSA Sbjct: 4 RTLVILGATGSIGTQTLDVLKKVKG-IRLIGISFHSNLELAFKIVKEFNVKNVAVTGDV---EFEDSSINVWKGPHSI---EEMLEALK-PDITMVA--VSGFSGLRAVLSSLEHSKRVCLANKESLVCGGFLVKKKLKEKRTELIPVDSEHSAIFQVIE--PE--VEKVVLTASGGALRDWEISKIDRARPEDVLRHPVWNMGARITVDSA 201
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CAMHC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=dxr PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.106e-32 Identity = 82/208 (39.42%), Postives = 119/208 (57.21%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 VLGSTGSIGT +L+I + V ALA N+ L Q+ F P+ V +++E L ++ +I +GE G+ E ++ TV+ +VG AGL P++ +GK + L+NKE+L+ GG F+ KI DSEH + ++ + A ++I+TASGGAF P++ L K ADALKHPNW+MG KIT+DSA Sbjct: 3 VLGSTGSIGTNSLEIARKFN--IEVEALACAENVKKLNAQIAEFHPKFVYIKDEKLKSKVAHN--------KIFSGENGICEMLNRCESKTVINALVGFAGLIPSLKIQNSGKILCLSNKESLVVGGKFL------DTSKIRAIDSEHFGLKFLLENSAKPA--KMIITASGGAFYKTPIKDLSSKKAADALKHPNWNMGAKITIDSA 192
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_HELHP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Helicobacter hepaticus GN=dxr PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.004e-32 Identity = 80/208 (38.46%), Postives = 121/208 (58.17%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LGSTGSIGT L+ VA H D + +L AG NITLL Q+ + P+ V + +++ +A + ++ G +G++E + ++ +VG AGLKP+ A++ K +ALANKE+L+ G + N I P DSEH ++ P + ++ +TASGGAFRD+P++K+ +ALKHPNW MG KIT+DSA Sbjct: 3 LLGSTGSIGTNALE-VASHFD-IPIESLCAGKNITLLNQQIAHYAPKNVCIADKN------DAHKLINGNYKLFFGSEGILEMIESSHSHLLLNALVGFAGLKPSFKALQCNKKLALANKESLVNAGWLL------QNADITPIDSEHFGLWYLQNNRP---ITKLYITASGGAFRDYPLDKIALATPQEALKHPNWQMGYKITIDSA 193
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_THEMA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermotoga maritima GN=dxr PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.560e-31 Identity = 81/212 (38.21%), Postives = 130/212 (61.32%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + + +LG+TGSIGTQTLD++ + + R++ ++ SN+ L VK F + VA+ + E +++ NV + + + ++EA + PD V + G +GL+ +A++E K + LANKE+L+ GG V + +++P DSEHSAIFQ ++ PE + +++LTASGGA RDW + K+ + D LKHP W+MG +ITVDSA Sbjct: 4 RTLVILGATGSIGTQTLDVLKKVKG-IRLIGISFHSNLELAFKIVKEFNVKNVAITGDV---EFEDSSINVWKGSHSI---EEMLEALK-PDITMVA--VSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQVME--PE--VEKVVLTASGGALRDWKISKIDRARPEDVLKHPVWNMGARITVDSA 201
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_FERNB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=dxr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.744e-31 Identity = 79/212 (37.26%), Postives = 124/212 (58.49%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K + +LG+TGSIGTQ++D++++ ++ +++V ++ G N L + V+RF ++K VE G + PD + I G G+K T+ A++ + IALA KE+++ G FV LA K+N++I+P DSEHSAIFQ + E + I++TASGGA RD P++K+ + + LKHP W+MG +ITVDSA Sbjct: 4 KTVVILGATGSIGTQSVDVISKLKN-YKLVGISFGKNRNLAEEIVQRF--------------DVKVYHGGVELSVGRRVDSIGALLELTKPDIT--ICAIPGFEGVKATIEALKYTRRIALATKESMVCAGKFVKELAKKNNVEIVPVDSEHSAIFQ----IYEPHIDHIVITASGGAVRDLPLDKIAGLTPEEVLKHPTWNMGGRITVDSA 194 The following BLAST results are available for this feature:
BLAST of FC876264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876264 ID=FC876264; Name=FC876264; organism=Citrus clementina; type=EST; length=723bpback to top |