FC876264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CAMLR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=dxr PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.725e-30 Identity = 84/208 (40.38%), Postives = 119/208 (57.21%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 VLGSTGSIG TL I E + AL+ G NI LL +Q+ FKP+ V +++E D+ ++ + I + G+ + + VV IVG AGL ++ A + GK +ALANKE+L+ G F KI DSEH+A+ I + ++++ +TASGGAF + ++ LK V V +ALKHPNWSMG KIT+DSA Sbjct: 3 VLGSTGSIGVNTLFIAKEKN--ISIEALSCGKNIKLLNEQIALFKPKFVCIQDEK--DK------HLVDHKNIFCAQDGLKKMISECKSKFVVNAIVGFAGLNSSLIAQKLGKTLALANKESLVVAGKFF------DTSKIKAIDSEHAALKCLIDKRKD--IKKLFITASGGAFYKYKIKDLKNVSVKEALKHPNWSMGAKITIDSA 192
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHEFN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella frigidimarina (strain NCIMB 400) GN=dxr PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.556e-30 Identity = 77/218 (35.32%), Postives = 111/218 (50.92%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG TL ++ + F V L A +++ + +P+ + +E+ E+K L N ++ G + + TV+ IVG AGL PT A++AGK + LANKE L+ G + A +LP DSEH+AIFQC+ L + I+LT SGG F + + L + A A HPNWSMG KI+VDSA Sbjct: 6 ILGATGSIGASTLSVMVNNPADFHVYGLVANASVQKMLALCITHQPEYAHMVDENAAMELKSLLPN-HCVTQVTTGAEALNALVTDSRTDTVMAAIVGAAGLVPTFDAVKAGKRVLLANKEALVMSGELFMHTARASGATVLPVDSEHNAIFQCLPTNVQAQLGYCDLSANGISHILLTGSGGPFLNTDLATLSAMTPAQACNHPNWSMGPKISVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHEB9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella baltica (strain OS195) GN=dxr PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.562e-30 Identity = 75/218 (34.40%), Postives = 114/218 (52.29%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG TL +++ + + V L A +++ + KP+V + +E+ +++ L ++ G ++ + TV+ IVG AGL PT+ A++AGK + LANKE L+ G + + +LP DSEH+AIFQC+ L + I+LT SGG F + L + A A KHPNWSMG KI+VDSA Sbjct: 6 ILGATGSIGASTLSVISANPFAYSVYGLVANASVDKMLALCVAHKPKVAHMVDEAAAKQLRAVLP-ATLNIQVTTGMNDLLGLVTAAEVDTVMAAIVGAAGLVPTLEAVKAGKRVLLANKEALVMSGELFIEATKRSGAVLLPVDSEHNAIFQCLPQEVQANLGRCDLAASGISHILLTGSGGPFLRSDLATLAAMTPAQACKHPNWSMGPKISVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHEB5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=dxr PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.562e-30 Identity = 75/218 (34.40%), Postives = 114/218 (52.29%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG TL +++ + + V L A +++ + KP+V + +E+ +++ L ++ G ++ + TV+ IVG AGL PT+ A++AGK + LANKE L+ G + + +LP DSEH+AIFQC+ L + I+LT SGG F + L + A A KHPNWSMG KI+VDSA Sbjct: 6 ILGATGSIGASTLSVISANPFAYSVYGLVANASVDKMLALCVAHKPKVAHMVDEAAAKQLRAVLP-ATLNIQVTTGMNDLLGLVTAAEVDTVMAAIVGAAGLVPTLEAVKAGKRVLLANKEALVMSGELFIEATKRSGAVLLPVDSEHNAIFQCLPQEVQANLGRCDLAASGISHILLTGSGGPFLRSDLATLAAMTPAQACKHPNWSMGPKISVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_HELPY (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Helicobacter pylori GN=dxr PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.562e-30 Identity = 82/209 (39.23%), Postives = 122/209 (58.37%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNI-KILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 VLGSTGSIG L I + + AL+ G NI L+ +Q++ FKP+ VA+ + S L++++ A E+ G +G+ + V+ IVG AGLK + +++ K +ALANKE+L++ G H +I +I P DSEH ++ +Q + +I++ASGGAFRD P+E + +ALKHPNWSMG KIT+DSA Sbjct: 3 VLGSTGSIGKNALKIAKKFG--IEIEALSCGKNIALINEQIQVFKPKKVAILDPSDLNDLEPLGA------EVFVGLEGIDAMIEECTSNLVLNAIVGVAGLKASFKSLQRNKKLALANKESLVSAG-------HLLDISQITPIDSEHFGLWALLQNKTLKP-KSLIISASGGAFRDTPLEFIPIQNAQNALKHPNWSMGSKITIDSA 195
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_SHEB2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella baltica (strain OS223) GN=dxr PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.118e-29 Identity = 75/218 (34.40%), Postives = 114/218 (52.29%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LG+TGSIG TL +++ + + V L A +++ + KP+V + +E+ +++ L ++ G ++ + TV+ IVG AGL PT+ A++AGK + LANKE L+ G + + +LP DSEH+AIFQC+ L + I+LT SGG F + L + A A KHPNWSMG KI+VDSA Sbjct: 6 ILGATGSIGASTLSVISANPLAYSVYGLVANASVDKMLALCVAHKPKVAHMVDEAAAKQLRAVLP-ATLNIQVTTGMNDLLGLVTAAEVDTVMAAIVGAAGLVPTLEAVKAGKRVLLANKEALVMSGELFIEATKRSGAVLLPVDSEHNAIFQCLPQEVQANLGRCDLAASGISHILLTGSGGPFLRSDLATLAAMTPAQACKHPNWSMGPKISVDSA 222
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_HELPH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Helicobacter pylori (strain HPAG1) GN=dxr PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.460e-29 Identity = 82/208 (39.42%), Postives = 121/208 (58.17%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 VLGSTGSIG L I + + AL+ G NI L+ +Q+K FKP+ VA+ + S L+ ++ A E+ G G+ + V+ IVG AGLK + +++ K +ALANKE+L++ G +L ++ +I P DSEH ++ +Q + +I++ASGGAFRD P+E + +ALKHPNWSMG KIT+DSA Sbjct: 3 VLGSTGSIGKNALKIAKKFG--VEIEALSCGKNIALINEQIKVFKPKKVAILDPSDLNNLEPLGA------EVFVGLDGIDAMIEECVSNLVLNAIVGVAGLKASFKSLQRNKKLALANKESLVSAGN-LLDIS-----QITPVDSEHFGLWALLQNKTLKP-KSLIISASGGAFRDTPLELIAIQNAQNALKHPNWSMGSKITIDSA 195
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_HELPS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Helicobacter pylori (strain Shi470) GN=dxr PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29 Identity = 82/209 (39.23%), Postives = 121/209 (57.89%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNI-KILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 VLGSTGSIG L I + K + AL+ G NI L+ +Q+K FKP+ VA+ + + L+ ++ A V G +G+ + V+ IVG AGL+ + +++ K +ALANKE+L++ G H +I +I P DSEH ++ +Q + +I++ASGGAFRD P+E + +ALKHPNWSMG KIT+DSA Sbjct: 3 VLGSTGSIGKNALKIAKKF--KVGIEALSCGKNIALINEQIKVFKPKKVAILDSNDLNGLEPLGAKV------FVGLEGIDAMIEECVSNLVINAIVGVAGLRASFKSLQTNKKLALANKESLVSAG-------HLLDISQITPIDSEHFGLWALLQNKALKP-KSLIISASGGAFRDTPLELIPIQNAQNALKHPNWSMGSKITIDSA 195
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_HELPJ (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Helicobacter pylori J99 GN=dxr PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29 Identity = 82/209 (39.23%), Postives = 121/209 (57.89%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNI-KILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 VLGSTGSIG L I + K + AL+ G NI L+ +Q+K FKP+ VA+ + + L+ ++ A E+ G G+ + V+ IVG AGLK + +++ K +ALANKE+L++ G H +I +I P DSEH ++ +Q + +I++ASGGAFRD P++ + +ALKHPNWSMG KIT+DSA Sbjct: 3 VLGSTGSIGKNALKIAKKFGVK--IEALSCGKNIALINEQIKVFKPKKVAILDPNDLNNLEPLGA------EVFVGLDGIDAMIEECVSNLVINAIVGVAGLKASFKSLQRNKKLALANKESLVSAG-------HLLDISQITPVDSEHFGLWALLQNKTLKP-KSLIISASGGAFRDTPLDLIAIQNAQNALKHPNWSMGDKITIDSA 195
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_HELP2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Helicobacter pylori (strain P12) GN=dxr PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29 Identity = 82/209 (39.23%), Postives = 121/209 (57.89%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNI-KILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 VLGSTGSIG L I + + AL+ G NI L+ +Q+K FKP+ VA+ + + L++++ A V G +G+ + V+ IVG AGLK + +++ K +ALANKE+L++ G H +I +I P DSEH ++ +Q + +I++ASGGAFRD P+E + +ALKHPNWSMG KIT+DSA Sbjct: 3 VLGSTGSIGKNALKIAKKFG--VEIEALSCGKNIALINEQIKVFKPKKVAILDPNDLNDLEPLGAKV------FVGLEGIDAMIEECVSNLVLNAIVGVAGLKASFKSLQRNKKLALANKESLVSAG-------HLLDISQITPVDSEHFGLWALLQNKTLKP-KSLIISASGGAFRDTPLELIAIQNAQNALKHPNWSMGSKITIDSA 195 The following BLAST results are available for this feature:
BLAST of FC876264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876264 ID=FC876264; Name=FC876264; organism=Citrus clementina; type=EST; length=723bpback to top |