FC876264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PELUB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelagibacter ubique GN=dxr PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 76/213 (35.68%), Postives = 115/213 (53.99%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTV-VTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K I++ GSTGSIG+ L I+ + + F++ L N L QVK F + V V + + + L N + K + + + + + + I G GLKPT+ I+ K IA+ANKE++I G + K+ +P DSEH +I+ + + +I +TASGG FR+ ++K + + V DALKHPNWSMGKKIT+DSA Sbjct: 2 KKIAIFGSTGSIGSSLLKIIKDDQKNFKIELLTVNKNYKKLIKQVKLFNVKNVIVTDYNSFLITTKLLKNAKVK--VFNNFDSLNKIFNTNNKIDYSMCAISGFDGLKPTLDIIKFTKTIAIANKESIICGWNLIKKDLKKYKTYFVPVDSEHFSIWSLLDNNKKNNFEKIYITASGGPFRNLSLKKFRNISVKDALKHPNWSMGKKITIDSA 212
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_HELPG (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Helicobacter pylori (strain G27) GN=dxr PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.248e-29 Identity = 81/209 (38.76%), Postives = 121/209 (57.89%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNI-KILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 VLGSTGSIG L I + + AL+ G NI L+ +Q++ FKP+ VAV + + L+ ++ A E+ G +G+ + V+ IVG AGL+ + +++ K +ALANKE+L++ G H +I +I P DSEH ++ +Q + +I++ASGGAFRD P+E + +ALKHPNWSMG KIT+DSA Sbjct: 3 VLGSTGSIGKNALKIAKKFG--VEIEALSCGKNIALINEQIQVFKPKKVAVLDPNDLNNLEPLGA------EVFVGLEGIDAMIEECASNLVLNAIVGVAGLRASFKSLQRNKKLALANKESLVSAG-------HLLDISQITPIDSEHFGLWALLQNKTLKP-KSLIISASGGAFRDTPLELIAIQNAQNALKHPNWSMGSKITIDSA 195
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_TROWT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Tropheryma whipplei (strain Twist) GN=dxr PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.236e-28 Identity = 82/213 (38.50%), Postives = 116/213 (54.46%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAA---RHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + ++GSTGSIGTQ +D + ++ D F VV LAA + +LL +Q QV+ +N + QG EAA +A V+ I G AGL T A ++ GK +ALANKE+LI GG + L + +I P DSEHSAI Q ++ + ++ILTASGG F D E L+ + + DAL HP W+MG I+++SA Sbjct: 4 VIIVGSTGSIGTQAIDFILKNRDSFLVVGLAASTQTSLLREQA-----QVLGTKNTA----------------------QGASEAAELIEATEADVVLNAITGAAGLLSTYATLKTGKRLALANKESLIMGGKYFLDMT-TFKGQITPVDSEHSAIAQAMKSGKFSEVNKLILTASGGPFYD--RESLEGITLKDALDHPTWNMGPMISINSA 186
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_TROW8 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Tropheryma whipplei (strain TW08/27) GN=dxr PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.615e-28 Identity = 82/213 (38.50%), Postives = 115/213 (53.99%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAA---RHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + ++GSTGSIGTQ +D + ++ D F VV LAA + +LL +Q QV +N + QG EAA +A V+ I G AGL T A ++ GK +ALANKE+LI GG + L + +I P DSEHSAI Q ++ + ++ILTASGG F D E L+ + + DAL HP W+MG I+++SA Sbjct: 4 VIIVGSTGSIGTQAIDFILKNRDSFLVVGLAASTQTSLLREQA-----QVFGTKNTA----------------------QGASEAAELIEATEADVVLNAITGAAGLLSTYATLKTGKRLALANKESLIMGGKYFLDMT-SFKGQITPVDSEHSAIAQAMKSGKFSEVNKLILTASGGPFYD--RESLEGITLKDALDHPTWNMGPMISINSA 186
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CORJK (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Corynebacterium jeikeium (strain K411) GN=dxr PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.332e-27 Identity = 79/221 (35.75%), Postives = 124/221 (56.11%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQV--VAVRNESLLDEIKEALA--------NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + VLGSTGSIGTQ L+++A++ ++F +V ++A GS +LA QV+ F + VAV +E + + + E E + E G + ++ +VG GL T+A + +ALANKE+L+AGG VL A + +++P DSEHSA+ QC++ + ++LTASGG FR + +L++V A HP WSMG+ T++SA Sbjct: 20 VVVLGSTGSIGTQALEVMADNPERFELVGISAHGSKPDVLAQQVRDFGLDLGRVAVASEHTAEWLDGEFGAHCIRGKDSARELVEAVGPELGECDV--------ILNALVGSLGLDATLATLGTKAKLALANKESLVAGGQLVLKAADEG--QLIPVDSEHSAMAQCLRSGRVDEVDSLVLTASGGPFRGYTRAQLEDVTPLQAANHPTWSMGQMNTLNSA 230
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CAMFF (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=dxr PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.279e-25 Identity = 77/212 (36.32%), Postives = 117/212 (55.19%), Query Frame = 1 Query: 100 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGV---IEAARHPDAVTVV-TGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 +LGS+GSIG + ++ K ALA ++ L Q+ +F P+ V + + L N+ E + + G+ +EA TVV +VG +GL+P++ + + G +ALANKE+L+AGG F+ I P DSEH + ++ P A++++I+TASGGAF D + +L+ V ALKHPNWSMG KIT+DSA Sbjct: 3 LLGSSGSIGKNVAFLAMKYGIKLD--ALACKTDYKELNSQISKFNPKFVYIEDNKL--------KNLVEHSRVFTSKDGIDKFLEACYDEFGSTVVINSLVGFSGLRPSLVSQKLGFKLALANKESLVAGGKFL------DTKSINPIDSEHFGLKFLLKNRP--AVKKMIITASGGAFYDMHINELEFVTAKSALKHPNWSMGAKITIDSA 196
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_TREPA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Treponema pallidum GN=dxr PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.293e-25 Identity = 77/210 (36.67%), Postives = 109/210 (51.90%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 + VLG TGSIG L ++ D+F +V A+G T A + R E L +I + E++ G + +A VV GI G AGL ++ ++ +ALANKE+++ + A + I+P DSEH+AIFQ I A+ +++LTASGG FR + E L V V DAL+HP W MGKKI+VDSA Sbjct: 6 VVVLGITGSIGAAALKLLRRFPDRFLLVG-ASGHRQTEYARALAR----------EFSLSDITMTGSCSEQE-----GRARIKRLLSSCEAEVVVNGIAGAAGLFASLEVLKTRCTLALANKESVVLAASLLHAAARESGATIVPVDSEHAAIFQLIAAHGAHAVAQVVLTASGGPFRTFSKECLAHVTVEDALQHPTWRMGKKISVDSA 199
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_MYCPE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycoplasma penetrans GN=dxr PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23 Identity = 65/215 (30.23%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV---AVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 K + V G+TG+IG +L+I+ ++ + +V + +N + + RF +V +V+ ++ ++ +E L P+I ++ +VG +GL T+ A++ D+ALANKE+L+ G + L + +I P DSEHS+++ ++ + ++ +I+T SGG F +L + ADA+KHPNW+MGKKI++DSA Sbjct: 12 KKVLVFGATGNIGFSSLEII--EKENYELVGFSFNNNYEKALEIINRFPNALVFSPSVKTKNTVNSFEELLEKTN--PDI------------------ILNALVGFSGLHITLLALKNNVDLALANKESLVVAGWLIEDLKRSSSSRIYPVDSEHSSLYDSLKNNNK-EIKELIITCSGGPFYKKEFNELLNINFADAVKHPNWNMGKKISIDSA 203
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_BLOFL (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Blochmannia floridanus GN=dxr PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.031e-22 Identity = 67/202 (33.17%), Postives = 105/202 (51.98%), Query Frame = 1 Query: 151 EHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP-EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 ++ DKF V AL A +++ ++ +Q PQ V + E + +K L +++ ++L+G + + VV+ + G A L+P +AI GK I LANKETL+ G + +K+N +LP DSE++AIFQ + L + + I+LT SGG KL ++ HPNWSMG KI+V+SA Sbjct: 7 QYRDKFAVRALVAHNDVAVMIEQCFLVSPQYVCMICEEVARNLKYKLVLMDKNNIQVLSGMKDACVLSALDAVDMVVSTMAGIARLQPIFSAIRVGKKILLANKETLVLSGQLFMTEVYKYNASVLPLDSEYNAIFQNLSVIYQKKLGQVSLSQYGICCIVLTDSGGVLYKITRTKLFKITPVQVYIHPNWSMGLKISVNSA 208
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_MYCGA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycoplasma gallisepticum GN=dxr PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20 Identity = 58/210 (27.62%), Postives = 110/210 (52.38%), Query Frame = 1 Query: 94 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723 I VLG+TGSIG Q +D++ + K+++V + N + +K+ P V ++ ++ NV+ +IE ++ I G G++ ++ A+ KD+ LANKE+L+ G + + I P DSEHSA++ ++ + ++++++TASG + + + +L+++ D L HPNW MG +I+++SA Sbjct: 3 ILVLGATGSIGKQAIDVICQL--KYQLVGFSYYQNHNEANNILKQLNPNYVLCHSDPKYNK------NVKSD---------LIELIDKSKPKVIINAINGYHGIEASLIALSKKKDLLLANKESLVIAGSQLEAIRKDTKTTIYPIDSEHSALYDLLKDKKKNQIKQLMITASGAGYFNKDISELRKLTYNDLLNHPNWKMGAEISINSA 195 The following BLAST results are available for this feature:
BLAST of FC876264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876264 ID=FC876264; Name=FC876264; organism=Citrus clementina; type=EST; length=723bpback to top |