FC876264

Overview
NameFC876264
Unique NameFC876264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15084 contig Ccv1_Contig15084:326..1048. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR2_BACAN (1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 OS=Bacillus anthracis GN=dxr2 PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.078e-56
Identity = 111/212 (52.36%), Postives = 146/212 (68.87%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD   ++L  V V DAL+HPNWSMG KIT+DSA
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSA 209          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_ALKOO (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Alkaliphilus oremlandii (strain OhILAs) GN=dxr PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.956e-56
Identity = 109/212 (51.42%), Postives = 146/212 (68.87%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LGSTGSIGTQTLD+V  H +KF++VAL+A  NI  + +Q+  F P++VAV +    + +    A + +K ++++G +G+IE A    A  VVT +VG  GL PTV AI  GK IALANKETL+  G  +   A KH ++I+P DSEHSAIFQC+QG     + RIILTASGGAFR+W  + ++  K  DALKHP W+MG K+T+DSA
Sbjct:    2 KNISILGSTGSIGTQTLDVVRNHPEKFKIVALSASGNIDAIENQIHEFHPEIVAVFHREKAEILS---ARIGKKVKVVSGIEGLIEVATLDSADIVVTSVVGSIGLIPTVEAIRCGKTIALANKETLVVAGELIKKEAEKHKVQIIPVDSEHSAIFQCLQGEDIHNISRIILTASGGAFRNWEKQDIQHAKAQDALKHPTWNMGSKVTIDSA 210          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CHLPB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium phaeobacteroides (strain BS1) GN=dxr PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.004e-54
Identity = 112/212 (52.83%), Postives = 144/212 (67.92%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K +S+LGSTGSIG  TLD+V +H +KF V  LA G +I LLA+Q+K F+P +V+VR+++    ++E L +  EKPEIL G +G         +  VV+ IVG AGL PTV+AI+AGKDIALANKETL+  G  V  L  +H + +LP DSEHSAIFQ + G  +  + RIILTASGG FR    E L+ V    ALKHP W+MG KIT+DSA
Sbjct:    2 KSLSILGSTGSIGLSTLDVVRQHPEKFNVTGLAEGHDINLLAEQIKEFRPDIVSVRDKASAGLLREQLGS--EKPEILWGIEGAAAVGAAEGSEMVVSAIVGAAGLVPTVSAIKAGKDIALANKETLVVAGQLVSDLVKEHKVTLLPVDSEHSAIFQSLSGHRKEDIERIILTASGGPFRHTSAEDLRHVGPEKALKHPQWTMGAKITIDSA 211          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_GEOSM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter sp. (strain M21) GN=dxr PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.312e-54
Identity = 109/212 (51.42%), Postives = 144/212 (67.92%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K +++LGSTGSIG  TLD+VA + D FRVVAL AG+N+ LL  Q++ F+P++V+V        +  +L    +KPEI+ G +G+I AA   +   VV  IVG AGL PT AAI AGKD+ALANKETL+  G  V+ +  +  +K+ P DSEH A+FQ + G     + R+ILTASGG F +W  E+L+   VADAL HPNWSMG+KITVDSA
Sbjct:    2 KNLTILGSTGSIGVSTLDVVAAYPDMFRVVALTAGNNLELLKTQIETFRPELVSVLTAEKAQALSRSLTG--KKPEIMHGVEGMIAAATASETTMVVAAIVGAAGLVPTTAAIMAGKDVALANKETLVTAGHLVMQMVREKKVKLYPVDSEHCAVFQSMAGHRSQDIARVILTASGGPFLNWGREQLQGATVADALNHPNWSMGRKITVDSA 211          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PELPD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelobacter propionicus (strain DSM 2379) GN=dxr PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.713e-54
Identity = 111/212 (52.36%), Postives = 144/212 (67.92%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K +S+LGSTGSIG  TL+IVA H D+FRV AL AG N+ LLA Q+++F P++ AV  +  +  + +    +E K  I+ G +G+IEAA   +   VV  IVG AGL PT AAI AGKDIALANKETL+  G   + +   H +K+ P DSEHSAIFQ ++G     + +IILTASGG F +  +E+L  V V DAL HPNWSMG+KIT+DSA
Sbjct:    2 KQLSILGSTGSIGVSTLEIVAAHPDRFRVSALTAGKNLELLARQIRQFSPRIAAVAAKEDVPRLAQLCDGLEVK--IVGGVEGLIEAATADETDMVVAAIVGAAGLVPTAAAIRAGKDIALANKETLVTAGHLFMEMVSSHGVKLYPVDSEHSAIFQSLEGHRSDDISKIILTASGGPFLNTSLEQLAGVTVGDALNHPNWSMGRKITIDSA 211          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CHLL2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dxr PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.817e-54
Identity = 111/212 (52.36%), Postives = 141/212 (66.51%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K +S+LGSTGSIG  TLD+V +H  KF +  LA G ++ LL +Q+  F+P VV+VR+ +  D++++ L     KPEI  G +G    A    A  VV+ IVG AGL PTV+AI+AGK IALANKETL+  G  V  L  KHN+++LP DSEHSAIFQ + G     + RIILTASGG FR  P E+LK      ALKHP W+MG KIT+DSA
Sbjct:    2 KALSILGSTGSIGLSTLDVVRQHPGKFTITGLAEGHDVGLLNEQINEFRPDVVSVRDAASADQLRKLLGT--HKPEIFYGIEGAATVAAAEGAEMVVSAIVGAAGLVPTVSAIKAGKHIALANKETLVVAGQLVSDLVKKHNVQLLPVDSEHSAIFQSLAGHRTEDIERIILTASGGPFRKTPAEELKLAGPEQALKHPQWTMGAKITIDSA 211          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PELTS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=dxr PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.985e-54
Identity = 108/212 (50.94%), Postives = 147/212 (69.34%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K I ++GSTGSIG QTL+++    D+F+VV L +G N  L+A+Q++ F+P  VA+  E  +  +KE LA     PE+  G  G+   A  P+A  VV  + G AG+ PT+AAI+AGKD+ALANKETL+A G  V+ +A +H   ILP DSEHSA++QC+ G   G + +IILTASGG FR+  +EKL++V V  ALKHPNW+MG KIT+DSA
Sbjct:    2 KNIVLIGSTGSIGRQTLEVIGSLPDRFKVVGLGSGKNWRLMAEQIRVFRPSAVAMAGEREIMNLKELLAG-SYCPELGWGRTGMESLASMPEADLVVVAVTGFAGIYPTIAAIQAGKDVALANKETLVAAGHLVMKMAERHRAAILPVDSEHSAVWQCLCGRNSGEVEKIILTASGGPFREMCLEKLEKVTVDMALKHPNWNMGSKITIDSA 212          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_EXIS2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dxr PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.985e-54
Identity = 106/212 (50.00%), Postives = 146/212 (68.87%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K +S++G TGSIGTQTLD++A + D+F++V+ A G NI +    + R +P++VAV +E++ ++++  L   +  P +L GE G+I  A    A  V+T +VG  GL+PT+AAIEAGK I LANKETL+  G  V+  A +  + ILP DSEH+AIFQC+ G     +R+IILTASGG+FRD   E+L  V V  AL HPNWSMG KIT+DSA
Sbjct:    2 KQVSIIGGTGSIGTQTLDVIAANPDRFQLVSFAFGKNIEVALPWLNRLRPELVAVLDETVKEQLEAVL---DYSPTVLVGEDGLIAVATADQADIVITAVVGAVGLRPTLAAIEAGKSIGLANKETLVTAGHLVMKKAREKGVAILPVDSEHAAIFQCLNGERRQDVRQIILTASGGSFRDQTREQLANVTVEQALNHPNWSMGAKITIDSA 210          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_EUBR3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=dxr PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.985e-54
Identity = 109/212 (51.42%), Postives = 152/212 (71.70%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LGSTGSIGTQTLD++ EH D  +VVAL+ G N++L+  Q + FKPQ V+V +E+   +++ +LA+ +   E+  G  G+I  A       VVT IVG  G++PT+AAI+A K IALANKETL+  G  ++PLA ++ + ILP DSEHSAIFQ +QG     +++I+LTASGG FR   + +L+ ++V DALKHPNWSMG+KIT+DS+
Sbjct:    2 KKISILGSTGSIGTQTLDVIREHGD-MQVVALSCGRNLSLIEKQAREFKPQFVSVSDENDAKKLRTSLADTDI--EVGYGMDGLIRCATIEPCDIVVTAIVGMLGIRPTIAAIKAKKTIALANKETLVTAGHIIIPLAKEYGVSILPVDSEHSAIFQSLQGNSMNPIKKILLTASGGPFRGRKLSELEGIRVEDALKHPNWSMGQKITIDSS 210          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_PROVI (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dxr PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.510e-54
Identity = 108/212 (50.94%), Postives = 147/212 (69.34%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            + +S+LGSTGSIG  TLD+V  H++ F VV LA G ++  LA+Q+K F+P +V+VR+E+  DE+K  L   + +PEI+ G +G    A    +  VV+ IVG AGL PT+ AI+AGKDIALANKETL+  G  V  L  ++ +++LP DSEHSAIFQ + G     + RIILTASGG FR+ P+E++K+     ALKHP W+MG KIT+DSA
Sbjct:    2 RALSILGSTGSIGLSTLDVVRRHKESFSVVGLAEGHDVHALAEQIKEFRPTIVSVRDENAADELKTLLGPAD-RPEIVHGIEGAGTVAAAEGSDMVVSAIVGAAGLTPTIKAIKAGKDIALANKETLVVAGQLVSDLVKQNGVELLPVDSEHSAIFQSLLGHRAEDVERIILTASGGPFRNTPLEEMKKAGPEQALKHPQWTMGAKITIDSA 212          
The following BLAST results are available for this feature:
BLAST of FC876264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 441
Match NameE-valueIdentityDescription
DXR2_BACAN4.078e-5652.361-deoxy-D-xylulose 5-phosphate reductoisomerase 2 ... [more]
DXR_ALKOO6.956e-5651.421-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_CHLPB1.004e-5452.831-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_GEOSM1.312e-5451.421-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PELPD1.713e-5452.361-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_CHLL23.817e-5452.361-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PELTS4.985e-5450.941-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_EXIS24.985e-5450.001-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_EUBR34.985e-5451.421-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PROVI6.510e-5450.941-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]

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Properties
Property NameValue
Genbank descriptionC32002F01EF DevOvary1 Citrus clementina cDNA clone C32002F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876264 ID=FC876264; Name=FC876264; organism=Citrus clementina; type=EST; length=723bp
ATAGTTCAATGTTCTGCTCAGGGACCTCCTCCTGCATGGCCAGGCCGAGC
TGTTACAGAGACTTTTCGTAAGACTTGGGATGGTCCAAAGCCAATCTCAG
TGCTTGGGTCAACTGGTTCTATTGGAACTCAGACGTTGGACATAGTTGCG
GAGCATGAAGATAAATTCAGAGTTGTGGCACTGGCAGCTGGTTCAAATAT
AACTCTTCTTGCTGATCAGGTGAAGAGATTCAAACCTCAAGTAGTTGCTG
TTAGAAATGAGTCATTACTTGATGAAATCAAGGAGGCTTTGGCTAATGTT
GAAGAAAAGCCCGAGATTTTGGCCGGGGAACAGGGAGTCATTGAGGCTGC
CCGACACCCAGATGCTGTCACCGTGGTGACAGGTATAGTCGGTTGTGCAG
GATTAAAGCCTACAGTTGCTGCGATAGAAGCAGGAAAAGATATAGCTTTG
GCCAATAAGGAGACATTGATTGCTGGTGGTCCTTTTGTCCTTCCTCTAGC
TCACAAGCATAACATAAAAATTCTTCCAGCTGATTCAGAACATTCTGCCA
TATTTCAGTGTATTCAAGGCTTGCCTGAGGGTGCACTTCGGCGCATTATT
TTAACTGCATCTGGTGGGGCTTTCAGGGACTGGCCGGTTGAGAAACTGAA
AGAAGTTAAAGTGGCTGATGCATTGAAGCATCCTAACTGGAGTATGGGAA
AAAAGATTACTGTCGATTCTGCT
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