FC876264

Overview
NameFC876264
Unique NameFC876264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15084 contig Ccv1_Contig15084:326..1048. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR1_BACAN (1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 OS=Bacillus anthracis GN=dxr1 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.220e-53
Identity = 102/212 (48.11%), Postives = 146/212 (68.87%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LGSTGSIGT  LD+V+ H + F++V L A  NI LL  Q+K F+P++V+V  + L D ++     +    +I  G  G+I  A HP++  V++ +VG +GL PT+ A++A KDIA+ANKETL+A G  V  LA ++  +++P DSEHSAIFQC+ G     + ++I+TASGGAFRD   E++K ++  DALKHPNW MG K+T+DSA
Sbjct:    3 KYISILGSTGSIGTSALDVVSAHPEHFKIVGLTANYNIELLEQQIKTFQPRIVSVATKELADTLR---TRISTNTKITYGTDGLIAVATHPNSNLVLSSVVGVSGLLPTIEALKAKKDIAIANKETLVAAGHIVTELAKQNGCRLIPVDSEHSAIFQCLNGENNKEIDKLIVTASGGAFRDKTREEMKTLQAKDALKHPNWLMGAKLTIDSA 211          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_DESHD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dxr PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.604e-52
Identity = 108/212 (50.94%), Postives = 148/212 (69.81%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K +++LGSTGSIGTQTLDIV ++ ++  V ALAAG N+  +  Q + FKPQ++ +  E    E+K+ +A+++   E+++G +G++         TVVT I G  GL+PT+ A++AGKDIALANKETL+AGG  V+  A +    ILP DSEHSAIFQC++  P   L +IILTASGG FR W  E+L+EV    AL+HPNW+MG KIT+DSA
Sbjct:    2 KRLTILGSTGSIGTQTLDIVRQNPEQLEVFALAAGKNVQEIELQAREFKPQIIGLMEEKAARELKQRVADLDI--EVVSGMEGLLRTVTDEVPDTVVTAISGRIGLEPTMEALKAGKDIALANKETLVAGGDLVMGTAQRLGRTILPVDSEHSAIFQCLEEDPR-TLDKIILTASGGPFRGWSEEQLREVTPERALQHPNWAMGAKITIDSA 210          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CHLCH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium chlorochromatii (strain CaD3) GN=dxr PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.094e-52
Identity = 109/212 (51.42%), Postives = 139/212 (65.57%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            + +S+LGSTGSIG  TLD+V +H D+F +V LA G ++  LA Q++ FKP  V+VR+     +++E L     KPE+  G  G    A       VV+ IVG AGL+PTVAAI+AGK IALANKETL+  G  V  L  +H + +LP DSEHSAIFQ + G     + RIILTASGG FR    E+LK+V +  ALKHP WSMG KIT+DSA
Sbjct:    2 RALSILGSTGSIGLSTLDVVRQHRDRFTIVGLAEGHDVAALAAQIEEFKPLAVSVRDAESAKKLQELLG--AHKPEVYYGLDGAATIAALDGVDMVVSAIVGAAGLRPTVAAIKAGKHIALANKETLVVAGELVSRLVAEHKVHLLPVDSEHSAIFQSLAGHRAEDVERIILTASGGPFRKTSAEELKQVTLEQALKHPQWSMGAKITIDSA 211          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CHLPD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=dxr PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.094e-52
Identity = 104/212 (49.06%), Postives = 142/212 (66.98%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            + +S+LGSTGSIG  TLD+V +H ++F +  LA G ++ +L  Q++ F P++V+VRN     E+   L N  EKPEI  G +G    A    A  VV+ IVG AGL PT++AI+AGK+IALANKET++  G  V  LA +H + I+P DSEHSAI+Q + G     + R+ILTASGG F +   E+L+EV +  ALKHP W+MG KIT+DSA
Sbjct:    2 RSLSILGSTGSIGLSTLDVVRQHPEQFTITGLAEGHDVGMLVKQIREFNPRLVSVRNADAAAELASLLGN--EKPEIFYGIEGAATVAAADGADMVVSAIVGAAGLVPTISAIKAGKNIALANKETMVVAGRLVTDLARQHKVTIIPVDSEHSAIYQSLLGHRHEDVLRLILTASGGPFLNTSAEELREVTLEQALKHPKWTMGAKITIDSA 211          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_DESRM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulfotomaculum reducens (strain MI-1) GN=dxr PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.357e-51
Identity = 110/212 (51.89%), Postives = 144/212 (67.92%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LGSTGSIG QTL++V    ++  VVALAAG N  L  +Q K +KP +V+++ E     +KE L   + +PEI  G  G++  A   +AV VVT + G  GL PT AAI+A K IALANKETL+A G +V  LA ++ ++ILP DSEHSAI+QC+ G    A+R+I LTASGG FR    ++L+ V    ALKHPNWSMG+KIT+DSA
Sbjct:    3 KQISILGSTGSIGRQTLEVVNSFPEELNVVALAAGRNRELFLEQCKAYKPLLVSLQLEEDALWLKEHLIKEKLRPEIRYGLDGLVAVATCHEAVVVVTALSGAIGLVPTCAAIKASKKIALANKETLVAAGQYVTKLAEEYKVEILPVDSEHSAIWQCLHGENRSAIRKIQLTASGGPFRQLNRQELENVTPEMALKHPNWSMGQKITIDSA 214          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_DESHY (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulfitobacterium hafniense (strain Y51) GN=dxr PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.773e-51
Identity = 106/212 (50.00%), Postives = 147/212 (69.34%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K +++LGSTGSIGTQTLDIV ++ ++  V ALAAG N+  +  Q + FKP+++ +  E    E+K+ +A+++   E+++G +G++         TVVT I G  GL+PT+ A++ GKDIALANKETL+AGG  V+  A +    ILP DSEHSAIFQC++  P   L +IILTASGG FR W  E+L+EV    AL+HPNW+MG KIT+DSA
Sbjct:    2 KRLTILGSTGSIGTQTLDIVRQNPEQLEVFALAAGKNVQEIELQAREFKPRIIGLMEEKAARELKQRVADLDI--EVVSGMEGLLRTVTDEVPDTVVTAISGRIGLEPTMEALKVGKDIALANKETLVAGGDLVMGTAQRLGRTILPVDSEHSAIFQCLEEDPR-TLDKIILTASGGPFRGWSEEQLQEVTPERALQHPNWAMGAKITIDSA 210          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CLOD6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium difficile (strain 630) GN=dxr PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.316e-51
Identity = 108/213 (50.70%), Postives = 147/213 (69.01%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA-NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LGSTGSIG QTLD+V ++ DKF +VA++A SNI LL +Q+  FKP+ V V  E+   ++KE L  N+E   E+LAG +G+   +   +   ++T +VG  GL PT+ AI+ G DIALANKETL+  G  V+  A K+N+ ILP DSEHSAIFQC+ G  +  + +IILTASGG FR     +L  +   +ALKHPNWSMG+KI++DS+
Sbjct:    2 KKISILGSTGSIGKQTLDVVRDNRDKFEIVAISANSNIELLLEQIVEFKPKYVTVFEENKALKLKEMLPKNIEI--EVLAGMEGLKIISSLDEVDVLLTAVVGMIGLVPTLCAIKKGIDIALANKETLVTAGELVMKEAEKYNVNILPVDSEHSAIFQCLNGENKKNIEKIILTASGGPFRGKKKGELVNITKNEALKHPNWSMGRKISIDSS 212          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_GEOKA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacillus kaustophilus GN=dxr PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.158e-51
Identity = 108/212 (50.94%), Postives = 138/212 (65.09%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG++GSIGTQTLD++  H D+FR+ A + G NI      +  F P +VAV +    D  K        +  I+ GE+G+IEAA  P A  VVT +VG  GL PT+ AIEAGK IALANKETL+  G  V+  A +  + +LP DSEHSAIFQC+QG     + ++ILTASGG+FRD    +L  V V +AL HPNWSMG KIT+DSA
Sbjct:    2 KYISILGASGSIGTQTLDVIRAHPDEFRLAAASVGKNIEAARRLIAEFSPSLVAVADR---DAYKVLYREYRGRTTIVYGEEGLIEAAVCPQADVVVTAVVGSVGLVPTLKAIEAGKAIALANKETLVVAGHLVMAAAKRRGVPLLPVDSEHSAIFQCLQGERMEHVDKLILTASGGSFRDKTRRELAHVTVEEALCHPNWSMGAKITIDSA 210          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CLOPE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium perfringens GN=dxr PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.158e-51
Identity = 102/212 (48.11%), Postives = 142/212 (66.98%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG TGSIGTQTLD++  H++ F +V + A  NI L  D +K F P+ VA+ +E    ++ + + +   K E++ G +G+++ A   +   VVT +VG  GLKPTV AI  GKDIALANKETL+  G  V+  A ++ +KILP DSEHSAIFQ +QG     + +I+LTASGG FR + +E LK V    ALKHP W+MG+KI++DS+
Sbjct:    2 KRISILGVTGSIGTQTLDVLRFHKEDFELVGITANRNIELTLDIIKEFSPKYVAINHEESYKKLVDLVKSEGLKCEVIYGMEGLVKVATLDEIDIVVTSVVGMIGLKPTVEAIRKGKDIALANKETLVVAGELVMREAKENGVKILPVDSEHSAIFQSLQGNAHNKIDKILLTASGGPFRGFTIEDLKSVTPERALKHPKWNMGQKISIDSS 213          
BLAST of FC876264 vs. ExPASy Swiss-Prot
Match: DXR_CLOP1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=dxr PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.158e-51
Identity = 102/212 (48.11%), Postives = 142/212 (66.98%), Query Frame = 1
Query:   88 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSA 723
            K IS+LG TGSIGTQTLD++  H++ F +V + A  NI L  D +K F P+ VA+ +E    ++ + + +   K E++ G +G+++ A   +   VVT +VG  GLKPTV AI  GKDIALANKETL+  G  V+  A ++ +KILP DSEHSAIFQ +QG     + +I+LTASGG FR + +E LK V    ALKHP W+MG+KI++DS+
Sbjct:    2 KRISILGVTGSIGTQTLDVLRFHKEDFELVGITANRNIELTMDIIKEFSPKYVAINHEESYKKLVDLVKSQGLKCEVIYGMEGLVKVATLDEIDIVVTSVVGMIGLKPTVEAIRKGKDIALANKETLVVAGELVMREAKENGVKILPVDSEHSAIFQSLQGNAHNKIDKILLTASGGPFRGFTIEDLKSVTPERALKHPKWNMGQKISIDSS 213          
The following BLAST results are available for this feature:
BLAST of FC876264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 441
Match NameE-valueIdentityDescription
DXR1_BACAN4.220e-5348.111-deoxy-D-xylulose 5-phosphate reductoisomerase 1 ... [more]
DXR_DESHD1.604e-5250.941-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_CHLCH2.094e-5251.421-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_CHLPD6.094e-5249.061-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_DESRM1.357e-5151.891-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_DESHY1.773e-5150.001-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_CLOD62.316e-5150.701-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_GEOKA5.158e-5150.941-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_CLOPE5.158e-5148.111-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_CLOP15.158e-5148.111-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]

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Properties
Property NameValue
Genbank descriptionC32002F01EF DevOvary1 Citrus clementina cDNA clone C32002F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876264 ID=FC876264; Name=FC876264; organism=Citrus clementina; type=EST; length=723bp
ATAGTTCAATGTTCTGCTCAGGGACCTCCTCCTGCATGGCCAGGCCGAGC
TGTTACAGAGACTTTTCGTAAGACTTGGGATGGTCCAAAGCCAATCTCAG
TGCTTGGGTCAACTGGTTCTATTGGAACTCAGACGTTGGACATAGTTGCG
GAGCATGAAGATAAATTCAGAGTTGTGGCACTGGCAGCTGGTTCAAATAT
AACTCTTCTTGCTGATCAGGTGAAGAGATTCAAACCTCAAGTAGTTGCTG
TTAGAAATGAGTCATTACTTGATGAAATCAAGGAGGCTTTGGCTAATGTT
GAAGAAAAGCCCGAGATTTTGGCCGGGGAACAGGGAGTCATTGAGGCTGC
CCGACACCCAGATGCTGTCACCGTGGTGACAGGTATAGTCGGTTGTGCAG
GATTAAAGCCTACAGTTGCTGCGATAGAAGCAGGAAAAGATATAGCTTTG
GCCAATAAGGAGACATTGATTGCTGGTGGTCCTTTTGTCCTTCCTCTAGC
TCACAAGCATAACATAAAAATTCTTCCAGCTGATTCAGAACATTCTGCCA
TATTTCAGTGTATTCAAGGCTTGCCTGAGGGTGCACTTCGGCGCATTATT
TTAACTGCATCTGGTGGGGCTTTCAGGGACTGGCCGGTTGAGAAACTGAA
AGAAGTTAAAGTGGCTGATGCATTGAAGCATCCTAACTGGAGTATGGGAA
AAAAGATTACTGTCGATTCTGCT
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