FC876271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 4.636e-36 Identity = 65/110 (59.09%), Postives = 85/110 (77.27%), Query Frame = 3 Query: 165 MGRAPCCEKVGLKKGRWTAEEDDILTKYIQANGEG-SWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 MGRAPCC+K +KKG W+ EED L YI+ +G G +W +LP+ GL RCGKSCRLRW+NYLR ++K G + EEE II L+ ++G+RWS+IA+ +PGRTDN+IKNYWN Sbjct: 1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWN 110
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 7.908e-36 Identity = 65/110 (59.09%), Postives = 85/110 (77.27%), Query Frame = 3 Query: 165 MGRAPCCEKVGLKKGRWTAEEDDILTKYIQANGEG-SWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 MGRAPCC+K +K+G W+ EED L YI+ G G +W S P AGL RCGKSCRLRW+NYLR ++K G+ + EE+ II L A++G+RWS+IA+++PGRTDN+IKNYWN Sbjct: 1 MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWN 110
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.349e-35 Identity = 66/98 (67.35%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 L +G WT ED IL YI +GEG W +LP AGL RCGKSCRLRW NYLR +KRGNI+++EEE+II+LH LGNRWSLIA +PGRTDNEIKN+WN Sbjct: 14 LNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWN 111
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.762e-35 Identity = 65/110 (59.09%), Postives = 85/110 (77.27%), Query Frame = 3 Query: 165 MGRAPCCEKVGLKKGRWTAEEDDILTKYIQANGEG-SWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 MGRAPCC+K +K+G W+ EED L YI+ G G +W +LP AGL RCGKSCRLRW+NYLR +++ G+ T EE+ II L AS+G+RWS+IA+++ GRTDN+IKNYWN Sbjct: 1 MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWN 110
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 5.126e-35 Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 KKG WT EED IL Y++A+G+G W + K GL RCGKSCRLRW+NYL ++KRGN T +EE++II+LH LGNRWSLIA +PGRTDN++KNYWN Sbjct: 17 KKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWN 113
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 6.695e-35 Identity = 63/98 (64.29%), Postives = 79/98 (80.61%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 +KKG W+ EED L +Y+ +NG+G W + KNAGL RCGKSCRLRWINYLR DLKRG + +EE++II+ H+ LGNRWS IA+ +PGRTDNEIKN+WN Sbjct: 18 MKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWN 115
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 6.695e-35 Identity = 68/109 (62.39%), Postives = 83/109 (76.15%), Query Frame = 3 Query: 165 MGRAPC-CEKVGLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYW 488 M + PC + V ++KG WT EED IL YI +GEG W SL ++AGL R GKSCRLRW+NYLR D++RGNIT EE+ +I++LHA GNRWS IA +PGRTDNEIKNYW Sbjct: 1 MDKKPCNSQDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYW 109
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 6.695e-35 Identity = 61/98 (62.24%), Postives = 81/98 (82.65%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 LKKG WT+ ED IL Y++ +GEG+W ++ KN GL RCGKSCRLRW N+LR +LK+G TAEEE +II+LH+ +GN+W+ +A+++PGRTDNEIKNYWN Sbjct: 40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWN 137
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 6.695e-35 Identity = 61/98 (62.24%), Postives = 81/98 (82.65%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 LKKG WT+ ED IL Y++ +GEG+W ++ KN GL RCGKSCRLRW N+LR +LK+G TAEEE +II+LH+ +GN+W+ +A+++PGRTDNEIKNYWN Sbjct: 40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWN 137
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.491e-34 Identity = 66/110 (60.00%), Postives = 84/110 (76.36%), Query Frame = 3 Query: 165 MGRAPC-CEKVGLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 M + PC V ++KG WT EED IL +I +GEG W ++ ++AGL R GKSCRLRW+NYLR D++RGNIT EE+ +I++LHA GNRWS IA ++PGRTDNEIKNYWN Sbjct: 1 MDKKPCNSHDVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWN 110 The following BLAST results are available for this feature:
BLAST of FC876271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876271 ID=FC876271; Name=FC876271; organism=Citrus clementina; type=EST; length=491bpback to top |