FC876271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 1.887e-29 Identity = 59/97 (60.82%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 +KG W+ EED+ L +I + G W ++P AGL R GKSCRLRWINYLR LKR I+AEEEE I+ H+SLGN+WS IA +PGRTDNEIKNYW+ Sbjct: 11 RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWH 107
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.597e-28 Identity = 54/101 (53.47%), Postives = 72/101 (71.29%), Query Frame = 3 Query: 186 EKVGLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYW 488 ++ G +KG WT +ED +L ++ G+ W + K +GL R GKSCRLRW+NYL LKRG +T +EE ++++LHA GNRWS IA +PGRTDNEIKNYW Sbjct: 3 QEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYW 103
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 6.069e-28 Identity = 53/96 (55.21%), Postives = 69/96 (71.88%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYW 488 +KG WT +ED +L ++ G+ W + K +GL R GKSCRLRW+NYL LKRG +T +EE ++++LHA GNRWS IA +PGRTDNEIKNYW Sbjct: 9 RKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYW 104
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.952e-26 Identity = 54/97 (55.67%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYW 488 ++KG WT +ED L ++ GE W + K +GL R GKSCRLRW+NYL LKRG ++ EE +I++LHA GNRWS IA +PGRTDNEIKNYW Sbjct: 8 IRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYW 104
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 9.690e-26 Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYW 488 ++KG WT +ED L ++ G+ W + K +GL R GKSCRLRW+NYL LK G ++ +EE +II+LHA GNRWS IA +PGRTDNEIKNYW Sbjct: 8 MRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYW 104
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 1.399e-24 Identity = 49/96 (51.04%), Postives = 65/96 (67.71%), Query Frame = 3 Query: 204 KGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 K +W EED IL Y+ G+ +W +PK GL SCR RW+N+L+ LK+G T EEE+ +++LHA LGN+WS +A PGRTDNEIKN+WN Sbjct: 18 KSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWN 113
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB98_ARATH (Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.601e-20 Identity = 46/104 (44.23%), Postives = 68/104 (65.38%), Query Frame = 3 Query: 186 EKVGLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLL--RCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 +K L KG+WTAEED +L + ++ G W + A +L R GK CR RW N+LR D+K+ + EE+ ++I+ H +GN+W+ IA +PGRT+N IKN+WN Sbjct: 211 KKSTLVKGQWTAEEDRVLIQLVEKYGLRKWSHI---AQVLPGRIGKQCRERWHNHLRPDIKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTENSIKNHWN 311
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 7.945e-20 Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 L KG WT EED + +++Q G W + K+ R GK CR RW N+L ++K+ + T EE+ II + H LGNRW+ IA +PGRTDN +KN+WN Sbjct: 19 LNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWN 115
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBA_MOUSE (Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 2.312e-19 Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 L KG WT EED + + +Q G W + K+ R GK CR RW N+L ++K+ + T EE+ II + H LGNRW+ IA +PGRTDN IKN+WN Sbjct: 85 LIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWN 181
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBA_HUMAN (Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 2.312e-19 Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 L KG WT EED + + +Q G W + K+ R GK CR RW N+L ++K+ + T EE+ II + H LGNRW+ IA +PGRTDN IKN+WN Sbjct: 85 LIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWN 181 The following BLAST results are available for this feature:
BLAST of FC876271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876271 ID=FC876271; Name=FC876271; organism=Citrus clementina; type=EST; length=491bpback to top |