FC876271

Overview
NameFC876271
Unique NameFC876271
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length491
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB_DROME (Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 3.943e-19
Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491
            L KG WT +EDD++ K ++  G   W  + +     R GK CR RW N+L  ++K+   T +E+EII + H  LGN+W+ IA  +PGRTDN IKN+WN
Sbjct:  134 LIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNG-RIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWN 230          
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBA_XENLA (Myb-related protein A OS=Xenopus laevis GN=mybl1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.943e-19
Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 3
Query:  198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491
            L KG WT EED  + + +   G   W  + K+    R GK CR RW N+L  D+K+ + T EE+ II   H  +GNRW+ IA  +PGRTDN IKN+WN
Sbjct:   84 LVKGPWTKEEDQRVIELVHKYGPKKWSIIAKHLKG-RIGKQCRERWHNHLNPDVKKSSWTEEEDRIIYSAHKRMGNRWAEIAKLLPGRTDNSIKNHWN 180          
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB_MOUSE (Myb proto-oncogene protein OS=Mus musculus GN=Myb PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491
            L KG WT EED  + + +Q  G   W  + K+    R GK CR RW N+L  ++K+ + T EE+ II + H  LGNRW+ IA  +PGRTDN IKN+WN
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWN 186          
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB_HUMAN (Myb proto-oncogene protein OS=Homo sapiens GN=MYB PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491
            L KG WT EED  + + +Q  G   W  + K+    R GK CR RW N+L  ++K+ + T EE+ II + H  LGNRW+ IA  +PGRTDN IKN+WN
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWN 186          
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB_CHICK (Myb proto-oncogene protein OS=Gallus gallus GN=MYB PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491
            L KG WT EED  + + +Q  G   W  + K+    R GK CR RW N+L  ++K+ + T EE+ II + H  LGNRW+ IA  +PGRTDN IKN+WN
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWN 186          
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB_BOVIN (Myb proto-oncogene protein OS=Bos taurus GN=MYB PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491
            L KG WT EED  + + +Q  G   W  + K+    R GK CR RW N+L  ++K+ + T EE+ II + H  LGNRW+ IA  +PGRTDN IKN+WN
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWN 186          
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBB_CHICK (Myb-related protein B OS=Gallus gallus GN=MYBL2 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.726e-19
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491
            L KG WT EED  + + ++  G   W  + K+    R GK CR RW N+L  ++K+ + T EE+ II + H  LGNRW+ IA  +PGRTDN +KN+WN
Sbjct:   81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKG-RLGKQCRERWHNHLNPEVKKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNHWN 177          
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 8.784e-19
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491
            L KG WT EED+ + + ++  G   W  + K     R GK CR RW N+L  ++K+ + T EE+ II + H  LGNRW+ IA  +PGRTDN +KN+WN
Sbjct:   81 LVKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRG-RMGKQCRERWHNHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWN 177          
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 3
Query:  198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491
            L KG WT EED  + + +Q  G   W  + K+    R GK CR RW N+L  ++K+ + T  E+ +I + H  LGNRW+ IA  +PGRTDN IKN+WN
Sbjct:   85 LIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWN 181          
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBB_MOUSE (Myb-related protein B OS=Mus musculus GN=Mybl2 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.957e-18
Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 3
Query:  198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491
            L KG WT EED  + + ++  G   W  + K+    R GK CR RW N+L  ++K+   T EE+ II + H  LGNRW+ IA  +PGRTDN +KN+WN
Sbjct:   81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKG-RLGKQCRERWHNHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWN 177          
The following BLAST results are available for this feature:
BLAST of FC876271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MYB_DROME3.943e-1944.90Myb protein OS=Drosophila melanogaster GN=Myb PE=1... [more]
MYBA_XENLA3.943e-1945.92Myb-related protein A OS=Xenopus laevis GN=mybl1 P... [more]
MYB_MOUSE5.150e-1946.94Myb proto-oncogene protein OS=Mus musculus GN=Myb ... [more]
MYB_HUMAN5.150e-1946.94Myb proto-oncogene protein OS=Homo sapiens GN=MYB ... [more]
MYB_CHICK5.150e-1946.94Myb proto-oncogene protein OS=Gallus gallus GN=MYB... [more]
MYB_BOVIN5.150e-1946.94Myb proto-oncogene protein OS=Bos taurus GN=MYB PE... [more]
MYBB_CHICK6.726e-1944.90Myb-related protein B OS=Gallus gallus GN=MYBL2 PE... [more]
MYBB_XENLA8.784e-1944.90Myb-related protein B OS=Xenopus laevis GN=mybl2 P... [more]
MYBA_CHICK1.498e-1844.90Myb-related protein A OS=Gallus gallus GN=MYBL1 PE... [more]
MYBB_MOUSE1.957e-1844.90Myb-related protein B OS=Mus musculus GN=Mybl2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32002F09EF DevOvary1 Citrus clementina cDNA clone C32002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876271 ID=FC876271; Name=FC876271; organism=Citrus clementina; type=EST; length=491bp
GGCTCACAGTCCACTCCAAGAGCCAAGCAAAATACAAGCTCTGTTCACTC
ACCATCCCTTTTCCATCCACTTGCAAACACTTGTACGGGGGCTTTGTTAA
TATAACTAAATATATACGATTACATTTCGTTCTGTTTGAGAGCGTGGATG
CGTACTTAAGAGGAATGGGGAGAGCTCCGTGTTGCGAGAAAGTGGGTCTA
AAGAAGGGGAGATGGACGGCTGAAGAGGATGACATATTGACCAAGTATAT
TCAAGCTAACGGAGAAGGGTCATGGAGGTCACTGCCCAAGAATGCTGGGT
TGCTGAGGTGTGGGAAGAGTTGCAGATTGCGGTGGATCAATTACTTGAGA
GCTGACTTGAAGAGAGGTAACATTACTGCTGAAGAGGAAGAGATCATCAT
TAAGTTGCATGCATCTTTGGGTAACAGGTGGTCTTTAATTGCAAGCAATA
TGCCAGGTAGAACAGATAACGAGATAAAGAACTACTGGAAC
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