FC876271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBB_HUMAN (Myb-related protein B OS=Homo sapiens GN=MYBL2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.957e-18 Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 L KG WT EED + + ++ G W + K+ R GK CR RW N+L ++K+ T EE+ II + H LGNRW+ IA +PGRTDN +KN+WN Sbjct: 81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKG-RLGKQCRERWHNHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWN 177
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB_XENLA (Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.360e-18 Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 L KG WT EED + + + G W + K+ R GK CR RW N+L ++K+ + T EE+ I + H LGNRW+ IA +PGRTDN IKN+WN Sbjct: 87 LIKGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWN 183
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.712e-18 Identity = 45/100 (45.00%), Postives = 61/100 (61.00%), Query Frame = 3 Query: 195 GLKKGRWTAEEDDILTKYIQANGEGSWRSLP-KNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 G+ KG W EED L + + G W S+ K G R GK CR RW N+L ++++ N T EE++III HASLGN+W+ I+ + GR N IKN+WN Sbjct: 274 GIVKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIPG--RIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWN 371
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.712e-18 Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 3 Query: 204 KGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 KG W+ EED+ L + + G +W + K+ R GKSCRLRW N L ++ +AEE+E I + HA GN+W+ IA + GRTDN +KN+WN Sbjct: 6 KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPG-RSGKSCRLRWCNQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWN 100
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.820e-17 Identity = 43/112 (38.39%), Postives = 61/112 (54.46%), Query Frame = 3 Query: 156 LRGMGRAPCCEKVGLKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 L+ GR+ KG WT EED+ L + +G W+ + LR G+ CR RW N L +KR T EE+ II+ H+ GN+W+ I+ +PGRT+ IKN+WN Sbjct: 741 LKKSGRSKSSSNESKAKGHWTKEEDEKLRSLVDLHGTKRWKYIASLL-CLRNGRQCRERWSNQLDPSIKRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWN 851
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.295e-17 Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPK--NAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYW 488 ++ RW EED +L Y++ G W + + N L R KSC RW NYLR +K+G++T EE+ ++I+L A GN+W IA+ +PGRT + +W Sbjct: 3 ERQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWW 100
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 8.222e-17 Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 L KG WT +EDD + + ++ G W + + R GK CR RW N+L ++K+ + EE++II HA GN+W+ IA +PGRTDN IKN+WN Sbjct: 199 LVKGAWTKDEDDKVIELVKTYGPKKWSDIALHLKG-RMGKQCRERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWN 295
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.124e-16 Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPK--NAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYW 488 ++ RW EED IL Y++ G W + + N L R KSC RW NYLR +K+G++T +E+ ++I+L A GN+W IA+ +PGRT + +W Sbjct: 8 ERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWW 105
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.960e-16 Identity = 37/98 (37.76%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 201 KKGRWTAEEDDILTKYIQANGEGSWRSLPK--NAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYW 488 ++ RW+ EED +L Y++ G W + + N L R KSC RW NYL+ +K+G++T EE+ ++I+L GN+W IA+ +PGRT + +W Sbjct: 3 ERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWW 100
BLAST of FC876271 vs. ExPASy Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.645e-15 Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = 3 Query: 198 LKKGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEEIIIKLHASLGNRWSLIASNMPGRTDNEIKNYWN 491 L KG W+ EED+ + ++ G W ++ ++ R GK CR RW N+L + + T EEE +I+ H GN+W+ + +PGR+DN IKN+WN Sbjct: 85 LVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPG-RIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWN 181 The following BLAST results are available for this feature:
BLAST of FC876271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876271 ID=FC876271; Name=FC876271; organism=Citrus clementina; type=EST; length=491bpback to top |