FC876273

Overview
NameFC876273
Unique NameFC876273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876273 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 5.526e-19
Identity = 54/103 (52.43%), Postives = 66/103 (64.08%), Query Frame = 3
Query:  162 DQSFACANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPN 458
            D+    A QL   +VLPM ++   EL + +I+ KAGPGA L  SDIA+ LPTKN +AP MLDRILRLLASYS++ CSL    DG    R Y L SV K+   N
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGK-VERLYGLASVCKFLTRN 117          
BLAST of FC876273 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 5.526e-19
Identity = 48/107 (44.86%), Postives = 69/107 (64.49%), Query Frame = 3
Query:  147 VDGERDQSFACANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVEC---SLDGSGARRRYSLNSVSKYYVPN 458
            ++ + +++F  A QLA  +VLPM +++  EL + ++I K+G GA +S  D+AAQLPT N DA  MLDRILRLL SY+++EC   +L   G  R Y L  V K+   N
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKN 116          
BLAST of FC876273 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.217e-19
Identity = 52/97 (53.61%), Postives = 66/97 (68.04%), Query Frame = 3
Query:  180 ANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPN 458
            A QLA  +VLPM ++A  EL + +I+ KAGPGA LS +D+A+QLPTKN +AP MLDR+LRLLASYS++  SL    DG    R Y L  V K+   N
Sbjct:   23 AMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGK-VERLYGLGPVCKFLTKN 118          
BLAST of FC876273 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 7.979e-18
Identity = 50/102 (49.02%), Postives = 67/102 (65.69%), Query Frame = 3
Query:  162 DQSFACANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECS---LDGSGARRRYSLNSVSKYYVPN 458
            D++   A QLA  +VLPMA+++  EL + +I+ K G  + +S ++IA++LPTKN +AP MLDRILRLL SYSV+ CS   L G G  R Y L  V KY   N
Sbjct:   17 DEAALFAMQLASASVLPMALKSALELDLLEIMAKNG--SPMSPTEIASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKN 116          
BLAST of FC876273 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.042e-17
Identity = 46/107 (42.99%), Postives = 70/107 (65.42%), Query Frame = 3
Query:  147 VDGERDQSFACANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVEC---SLDGSGARRRYSLNSVSKYYVPN 458
            ++ + +++F  A QLA  +VLPM +++  EL + ++I KAG GA +S +++AAQL T N +A  MLDRILRLL SY+++EC   +L   G +R Y L  V K+   N
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKN 116          
BLAST of FC876273 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.361e-17
Identity = 53/100 (53.00%), Postives = 65/100 (65.00%), Query Frame = 3
Query:  180 ANQLAMGTVLPMAMQAVYELGIFQIIDKA---GPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPN 458
            A QLA  +VLPM ++A  EL + +I+ K+   G GA +S ++IAAQLPT N DAP MLDR+LRLLASYSVV CSL    DG    R Y L  V K+   N
Sbjct:   25 AMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGK-VERLYGLAPVCKFLTKN 123          
BLAST of FC876273 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.032e-17
Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = 3
Query:  180 ANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECS---LDGSGARRRYSLNSVSKYYVPN 458
            A QLA  +VLP  + A  EL + +I+ +AGPGA L+  ++A+QLPT+N DAP MLDRI RLLASYSV+ C+   L      R Y L  + K+ V N
Sbjct:    5 AMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKN 100          
BLAST of FC876273 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.965e-16
Identity = 53/113 (46.90%), Postives = 69/113 (61.06%), Query Frame = 3
Query:  135 MGSIVDGERDQSFACANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLP-TKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPN 458
            MGS  D   DQ+F  A QLA  +VLPM ++   EL + + I KAGP   +S+S++ AQLP   N +AP M+DRI  LLASYSV+ C+L    DG  A R Y L  V K+ + N
Sbjct:    1 MGSNQD---DQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGC-AERFYGLAPVCKFLIKN 109          
BLAST of FC876273 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.078e-14
Identity = 47/97 (48.45%), Postives = 60/97 (61.86%), Query Frame = 3
Query:  180 ANQLAMGTVLPMAMQAVYELGIFQIIDKA-GPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECS---LDGSGARRRYSLNSVSKYYVPN 458
            A QLA   VLPMA++A  EL + +I+ K+  P   +S ++IAAQLPT N +AP MLDR+LRLLASYSVV  +   L      R Y L  V K+   N
Sbjct:   25 AMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKN 121          
BLAST of FC876273 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.408e-14
Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 3
Query:  180 ANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSLDGSGARRRYSLNSVSKYYVPN 458
            A QLA  +VLPM +++  EL + +II   G    +S ++IA+ LPT N DAP M+DRILRLL+ YSVV CS+     +R Y L  V KY   N
Sbjct:    4 AMQLACASVLPMVLKSAIELDLLEII--RGQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKN 94          
The following BLAST results are available for this feature:
BLAST of FC876273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT2_POPTM5.526e-1952.43Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_OCIBA5.526e-1944.86Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_ROSCH7.217e-1953.61Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
OMT1_ARATH7.979e-1849.02Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT2_OCIBA1.042e-1742.99Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CLABR1.361e-1753.00Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_EUCGL3.032e-1748.96Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_ZINEL1.965e-1646.90Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
IEMT_CLABR1.078e-1448.45(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
OMT2_CHRAE1.408e-1447.31Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionC32002F12EF DevOvary1 Citrus clementina cDNA clone C32002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876273 ID=FC876273; Name=FC876273; organism=Citrus clementina; type=EST; length=459bp
GGTGATTGGATACTGTAGAAAACACATGGTTGGCATGCTTCTCTTGTTAG
CTTTGAATGAACAAGTCTTTATTTCAAACCCGCTGGCCAAATAAGAAACC
CCTCAAAGCGTAGAAGAAATTCAAGAAACTTAAAATGGGTTCTATAGTTG
ATGGAGAAAGAGACCAAAGCTTTGCATGTGCTAATCAATTGGCGATGGGT
ACAGTGCTACCCATGGCCATGCAAGCGGTGTATGAGCTAGGCATTTTCCA
GATCATAGACAAAGCTGGTCCTGGTGCAAAGCTCTCTGCTTCAGATATTG
CAGCCCAGTTGCCCACCAAGAACAAAGACGCACCCACGATGCTGGATCGG
ATTCTCAGGCTTCTGGCTAGCTACAGTGTTGTTGAGTGCTCACTTGATGG
TTCTGGTGCCCGGAGACGATATAGTTTAAATTCTGTCTCCAAATACTATG
TGCCTAACA
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