FC876275

Overview
NameFC876275
Unique NameFC876275
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:11..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.105e-25
Identity = 59/157 (37.58%), Postives = 90/157 (57.32%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTE--PVNLAQQMNLCVANALGRVMLG 616
            PPGP   PI+GNL +L  +PH+ +  L + HGP+M L+LG+             + LK HD +  +RP    +K I+YN++DI F PYG  WR LRK++   LFS K  + +R++R+EE   L + L+ A  +  PVNL + +    A+ + R+  G
Sbjct:   32 PPGPPKLPIIGNLHYLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKLSEASEKQSPVNLKKALFTLSASIVCRLAFG 188          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.155e-23
Identity = 54/142 (38.03%), Postives = 86/142 (60.56%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTE--PVNLAQQ 571
            PP P  +PI+GNL  LG +PHQS+  L++T+GP+M L+LG              Q LKI+D +  +RP  +GAK ++YNY DI F P+   W+ LR+I    LFS K +   + +++EE+ +L  +   + ++  PVNL+++
Sbjct:   32 PPSPPGFPIIGNLHQLGELPHQSLWSLSKTYGPVMLLKLGSVPTVVVSSSETAKQVLKINDLHCCSRPSLAGAKELSYNYLDIAFSPFDDYWKELRRICVQELFSAKRVHSIQPIKEEEVRKLIVSATESASQKSPVNLSEK 173          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.508e-23
Identity = 56/157 (35.67%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTR--ALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PPGP   PI+GNL  LG  PH+++  L++T+GPLM L+LG                LK +D    +RP  +    I YN +D+VF PY   WR +RK++   L++ K +  +RH+R+EE+A   R    A++  E VNL+Q++     + + R+  G
Sbjct:   30 PPGPPRLPIIGNLHQLGEKPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVICRIGFG 186          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 2.573e-23
Identity = 54/157 (34.39%), Postives = 88/157 (56.05%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTE--PVNLAQQMNLCVANALGRVMLG 616
            PP P  +PI+GNL  LG +PHQS+  L++ +GP+M L+ G              Q LKIHD N  +RP  +G + ++YNY DIVF P+   W+ LR++    LFS K +   + +R+EE+ +L  + + +  +  PVNL++++       + +   G
Sbjct:   32 PPSPPGFPIIGNLHQLGELPHQSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEVKKLMNSFSESAAQKTPVNLSEKLASLTVGVICKAAFG 188          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.389e-23
Identity = 57/157 (36.31%), Postives = 85/157 (54.14%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGT--EPVNLAQQMNLCVANALGRVMLG 616
            PP P   PI+GNL  LG +PH+S+  LA   GPL+ L LG              + LK HD  F++RP  + A+ I Y+  D+ F PYG  WR +RKI    L S K ++ YR +R+EE+  +   ++ + +  E VNL++ + L  +  + RV  G
Sbjct:   32 PPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRVAFG 188          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.277e-22
Identity = 52/139 (37.41%), Postives = 82/139 (58.99%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTE--PVNL 562
            PP P   PI+GNL  LG +PHQS+  L++ +GP+M L+LG              Q LKIHD +  +RP  +GA+ ++YNY DI F PY   W+ +RK++   LFS K +   + ++ EE+ +L  +++ +  +  P+NL
Sbjct:   32 PPSPPGCPIIGNLHQLGELPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINL 170          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.277e-22
Identity = 52/157 (33.12%), Postives = 85/157 (54.14%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGT--EPVNLAQQMNLCVANALGRVMLG 616
            PP P  +P++GNL  +G +PH+S+  LA  +GP+M L  GF             + L+ HD +  +RP   G + ++ N++D+ F PYG  W+  RK +   LF  K +  +RH+R+EE   L + L+ +     PV+L++ +    A+   RV LG
Sbjct:   31 PPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVNRSPVDLSKSLFWLTASIFFRVALG 187          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.277e-22
Identity = 53/157 (33.76%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTE--PVNLAQQMNLCVANALGRVMLG 616
            PP P  +P++GNL  +G +PH+S+  LA  +GP+M L  GF             + L+ HD +  +RP   G + ++ +++DI F PYG  W+  RK +   LF  K +  +RH+R+EE   L + L+ +  +  PV+L++ +    A+ L RV LG
Sbjct:   31 PPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVDRSPVDLSKSLFWLTASILFRVALG 187          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.668e-22
Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PPGP+ WPI+GN+  +  + H+ +A LA+ +G L +LR+GF             Q L++ DS FSNRP      ++ Y+  D+ F  YGP WR +RK+    +FS K  + +  VR +E+ ++ R+++    +P+N+ +Q+     N   R   G
Sbjct:   41 PPGPRGWPIIGNMLMMDQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVR-DEVDKMVRSVSCNVGKPINVGEQIFALTRNITYRAAFG 194          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.178e-22
Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PP P   P++GNL  LG   H+S+  L+R +GPLM L LG              + LK HD  F+NRP +  ++ + YN +D+   PYG  WR ++ +   HL S K +  +R VR+EE+  +   +  + + P N+++ +     + + RV LG
Sbjct:   31 PPSPPGLPLIGNLHQLGRHTHRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLPFNVSKVLECLTNDVICRVALG 185          
The following BLAST results are available for this feature:
BLAST of FC876275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
C71BN_ARATH2.105e-2537.58Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH1.155e-2338.03Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71B1_THLAR1.508e-2335.67Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71BY_ARATH2.573e-2334.39Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE4.389e-2336.31Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71BV_ARATH1.277e-2237.41Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH1.277e-2233.12Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH1.277e-2233.76Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH1.668e-2232.90Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71AP_ARATH2.178e-2232.90Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32002G02EF DevOvary1 Citrus clementina cDNA clone C32002G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876275 ID=FC876275; Name=FC876275; organism=Citrus clementina; type=EST; length=616bp
GGTACCATTTCTACGCTTTCTCTGGGAAACGAAACAAAGAGCAATGTCTA
CTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTGTCATTTCT
TTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCCCACCGTCT
GCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCCTCACTTGG
GCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCCACGGCCCC
CTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCCGCTTCCGC
TTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTTCTCCAACC
GCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATCAGGACATC
GTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAGATCAGCTC
CGCTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCACGTTCGCC
AGGAAGAGATGGCGGAGCTCACGCGCGCGTTGGCGAGTGCAGGAACGGAG
CCTGTGAACTTAGCTCAACAGATGAACTTGTGCGTTGCGAATGCCCTAGG
GAGGGTGATGCTAGGC
back to top