FC876275

Overview
NameFC876275
Unique NameFC876275
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:11..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.561e-20
Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGT--EPVNLAQQMNLCVANALGRVMLG 616
            PPGP   PI+GNL  LG  PH S+  L+  +GPLM LR G              + LK  D+   +RP  +    + YN +DI F PY   WR +RK++   L++ K +  ++H R+EE+A L   +  A +  +PVNL  ++     + + RV+ G
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKLMKLSGSVICRVVFG 186          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.039e-20
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPN-SGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PPGP   PI+GN   L G   H  +  LA+ +GPLM+L++G              +  + HD  F++RP N    K ++Y++ D+V  PYG  WR LRKIS   L S K++  +R +R+EE+    +++ S     +NL+++++L +     R   G
Sbjct:   27 PPGPPQIPILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRINLSKEISLLIYGITTRAAFG 183          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.039e-20
Identity = 54/157 (34.39%), Postives = 81/157 (51.59%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAG--TEPVNLAQQMNLCVANALGRVMLG 616
            PPGP   P +GNL  L  +P ++   L   +GP++ LR GF             + LKIHD    +RP  +G + I+YN++DI F PYG  W+ +RK+S   LF+ K    +R +R+EE   L + L        PVNL + +   V + + R+  G
Sbjct:   29 PPGPPKLPFIGNLHQLQELPPRN---LNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKLTELALTRSPVNLKKTLFTLVGSIVCRIGFG 182          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.039e-20
Identity = 48/155 (30.97%), Postives = 81/155 (52.26%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            P  P   P++GNL  LG  PH+S+  L+  +GPLM L LG                LK HD  F++RP +   + + Y+ +D+ F PYG  WR ++ +    L S K +  +R+VRQEE++ +   +  + +  VN+++ +     + + R+ LG
Sbjct:   33 PRSPPRLPLIGNLHQLGHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKSSSLQVNVSELLGSLTNDVISRIALG 187          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.477e-20
Identity = 57/157 (36.31%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALA-SAGTEP-VNLAQQMNLCVANALGRVMLG 616
            PPGP   PI+GNL  LG   H+S   L++ +GP+M+L  G              + LK HD     RP  +  K  +YNY+DI F  YG  WR +RK++   LFS K L  +R++R+EE   L   L+ SA T   V+L + +    A+ + R+  G
Sbjct:   29 PPGPLGLPIIGNLHQLGKSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKSAETRTMVDLRKALFSYTASIVCRLAFG 185          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 5.932e-20
Identity = 49/157 (31.21%), Postives = 80/157 (50.96%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRAL--ASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PP P   P++GNL  LGP PH+ +  L+  +GPLM L  G                +K HD  F+NRP +          +DI+F PYG  W+ ++ +   HL + K +  + ++R+EE+  +T  L  AS+ +  VNL++ +     + + R+ LG
Sbjct:   34 PPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTNDIICRITLG 190          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.932e-20
Identity = 49/154 (31.82%), Postives = 80/154 (51.95%), Query Frame = 2
Query:  155 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            P P   P++GNL  LG  PH+S+  L+  +GPLM L  G                LK HD  F++RP +   + + Y+  D+   PYG  WR ++ +   HLFS K +  +R VR+EE++ +   +  + + PVNL++ +     + + +V LG
Sbjct:   33 PSPPGLPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLPVNLSKILVSLTNDVICKVALG 186          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.012e-19
Identity = 48/154 (31.17%), Postives = 80/154 (51.95%), Query Frame = 2
Query:  155 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            P P   P++GNL  L   PH+S+  L+  +GPLM L  G                LK HD  F++RP +   + + Y  +++   PYG  WR ++ +S  HL S K +  ++ VRQEE+  +   +  + ++PVNL++ ++    + + RV LG
Sbjct:   31 PSPPRLPLIGNLHQLSQHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSKPVNLSKILSSLTNDVICRVALG 184          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.321e-19
Identity = 50/157 (31.85%), Postives = 83/157 (52.87%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEP--VNLAQQMNLCVANALGRVMLG 616
            PP P   PI+GNL  LG +PHQS+  L++ +GP+M L+LG              Q LK +D +  +RP   G + ++YNY DI F  +   W+ LRK+    LF  K ++  + +++ EM +L  ++A + ++   VNL+        N + + + G
Sbjct:   31 PPSPPGLPIIGNLHQLGELPHQSLCKLSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLSDTFLSLNVNVICKAVFG 187          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.321e-19
Identity = 49/155 (31.61%), Postives = 79/155 (50.97%), Query Frame = 2
Query:  155 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELT-RALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            P P+  PI+GNL  LG +PH+S+  L++ +GP+M L  G                +K HD  +++RP +S    ++Y  +D+ F P+G  WR  + I+  HL S   +  YR+VR EE A +  +      +  +NL + +     N + RV LG
Sbjct:   39 PSPRKLPIIGNLHQLGSLPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSVINLGEHLCSLTNNIISRVALG 193          
The following BLAST results are available for this feature:
BLAST of FC876275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
C71BB_ARATH1.561e-2034.39Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO2.039e-2033.12Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71BT_ARATH2.039e-2034.39Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH2.039e-2030.97Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH3.477e-2036.31Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71AR_ARATH5.932e-2031.21Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH5.932e-2031.82Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH1.012e-1931.17Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH1.321e-1931.85Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME1.321e-1931.61Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionC32002G02EF DevOvary1 Citrus clementina cDNA clone C32002G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876275 ID=FC876275; Name=FC876275; organism=Citrus clementina; type=EST; length=616bp
GGTACCATTTCTACGCTTTCTCTGGGAAACGAAACAAAGAGCAATGTCTA
CTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTGTCATTTCT
TTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCCCACCGTCT
GCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCCTCACTTGG
GCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCCACGGCCCC
CTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCCGCTTCCGC
TTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTTCTCCAACC
GCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATCAGGACATC
GTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAGATCAGCTC
CGCTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCACGTTCGCC
AGGAAGAGATGGCGGAGCTCACGCGCGCGTTGGCGAGTGCAGGAACGGAG
CCTGTGAACTTAGCTCAACAGATGAACTTGTGCGTTGCGAATGCCCTAGG
GAGGGTGATGCTAGGC
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