FC876275

Overview
NameFC876275
Unique NameFC876275
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:11..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.726e-19
Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVN 559
            PPGP   PI+GNL  LG + ++S   +++ +GP++ LRLG              + LK HD     RP  +      YN++DI F P+G  WR +RKI++  LFS K L  +R++R+EE   L + ++ +  E  N
Sbjct:   29 PPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQN 164          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.726e-19
Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALA-SAGTEP-VNLAQQMNLCVANALGRVMLG 616
            PPGP   PI+GNL  LG   H+S   L++ +GP+M+LR G              + LK HD     RP  S      YN++DI F  YG  WR +RK++   LFS K L  +R++R+EE   L + +  SA T+  V+L + +    A+ + R+  G
Sbjct:   29 PPGPISLPIIGNLHQLGKSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTLVDLRKALFSYTASIVCRLAFG 185          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.944e-19
Identity = 49/157 (31.21%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHL--GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PPGP   PI+GN+ +L   P+PH  +  L+  +G LM+L+LG              + +K HD  F++RP    A+ + Y+++ + F PYG  WR LRKI +  L S K +  ++ +R+E +    + +A+     VN+ +++   V     R  LG
Sbjct:   36 PPGPWKLPIIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMATIEGSQVNVTKEVISTVFTITARTALG 192          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.021e-19
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEE---MAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PPGP   PI+GNL  L  + H+ +  L++ HGP+M+LRLGF             + LK HD    +RP    ++  + N +DI F  YG  WR LRK+S    FS K +  ++++R+EE   M +  + LAS    PV+L++ +    A+ + R   G
Sbjct:   33 PPGPAKLPIIGNLHQLQGLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASK-QSPVDLSKILFGLTASIIFRTAFG 189          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19
Identity = 54/161 (33.54%), Postives = 83/161 (51.55%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGT--EPVNLAQQM-----NLCVANALGRVM 610
            PPGP   P +G + HL G +PH+ +  LA  +GPLM+L+LG              Q LK HD  F++RP       I YN +DI F PYG  WR +RKI    + S K++  +  +R +E+  L  ++    T  E VN  +++     ++   +A G+V+
Sbjct:   32 PPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVNFTERIIWFTSSMTCRSAFGQVL 192          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19
Identity = 51/157 (32.48%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGT--EPVNLAQQMNLCVANALGRVMLG 616
            PPGP   PI+GNL  LG  PH+S+  L+  +GPL+YL+LG                LK  D +  +R   +    I+YN +D+ F PY   W+ +RK++   L++ K +  +R++R+EE+A     +  + +  E VNL Q +     + + RV  G
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFIKHSASLEEIVNLNQTLVKLSGSVICRVGFG 186          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.119e-18
Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAG 544
            PP PK  PI+G+L  + P+PHQ    L+  HGP+M L LG              +FLK H+ NFSNRP     +++A  +   VF PYGP  + ++K+  + L  G+ LD +  VRQ+E  +  + +   G
Sbjct:   30 PPSPKGLPIIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRP----GQNVAVQFLTYVFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKG 156          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.908e-18
Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPM-PHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAG--TEPVNLAQQM 574
            PPGP P P++GNL  L  + P +  AG A+ +GP++  R+G              + LK  D NF++RPP+ G + I+Y  +D+    Y P +R +RK+   HLFS   +  ++HVR+EE   +   +  A   +E V++++ M
Sbjct:   31 PPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELM 174          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.908e-18
Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRAL--ASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G                +K HD   +NRP     + I    +++VF PYG  WR ++ +   +L + K +  +  VR+EE++E+   +  AS+ + P+NL++ +    ++   RV LG
Sbjct:   34 PPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNGGREMVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSELLLTLTSDVTSRVSLG 190          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.908e-18
Identity = 48/157 (30.57%), Postives = 79/157 (50.32%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRAL--ASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G              + LK HD  F+NRP +     +    +D+VF PYG  WR ++ +   +L + K +  +  +R+EE+ E+ + L  AS+ +   NL++      ++   R+ LG
Sbjct:   34 PPSPWRLPLIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLSELFVTLPSDVTSRIALG 190          
The following BLAST results are available for this feature:
BLAST of FC876275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
C71BZ_ARATH1.726e-1935.29Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BL_ARATH1.726e-1935.67Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71D9_SOYBN2.944e-1931.21Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71B4_ARATH5.021e-1934.81Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71D7_SOLCH6.558e-1933.54Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BD_ARATH6.558e-1932.48Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN1.119e-1835.88Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C83A1_ARATH1.908e-1833.33Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71AE_ARATH1.908e-1830.57Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.908e-1830.57Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32002G02EF DevOvary1 Citrus clementina cDNA clone C32002G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876275 ID=FC876275; Name=FC876275; organism=Citrus clementina; type=EST; length=616bp
GGTACCATTTCTACGCTTTCTCTGGGAAACGAAACAAAGAGCAATGTCTA
CTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTGTCATTTCT
TTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCCCACCGTCT
GCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCCTCACTTGG
GCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCCACGGCCCC
CTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCCGCTTCCGC
TTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTTCTCCAACC
GCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATCAGGACATC
GTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAGATCAGCTC
CGCTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCACGTTCGCC
AGGAAGAGATGGCGGAGCTCACGCGCGCGTTGGCGAGTGCAGGAACGGAG
CCTGTGAACTTAGCTCAACAGATGAACTTGTGCGTTGCGAATGCCCTAGG
GAGGGTGATGCTAGGC
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