FC876275

Overview
NameFC876275
Unique NameFC876275
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:11..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.492e-18
Identity = 52/157 (33.12%), Postives = 81/157 (51.59%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTE--PVNLAQQMNLCVANALGRVMLG 616
            PPGP   PIVGNL  L  M H+ +  L++ HGP+M+L+LGF             + LK HD     RP  + A+  + N ++I    Y   WR LRK++    FS K +  +R+VR+EE   + + L     +  PV+L++ +    A+ + R + G
Sbjct:   33 PPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLFCLAASTVFRPVFG 189          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.255e-18
Identity = 45/143 (31.47%), Postives = 79/143 (55.24%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMN 577
            PP P   P++G+L  L G +P      +A+ +GP+ +++LG              Q +K+ D NF++R    G++ + Y+  DI+F PY   WR +R+I    L S K +  + ++RQEE+  L R L S+G  PV++ ++++
Sbjct:   35 PPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGSSGGAPVDVTEEVS 177          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.255e-18
Identity = 45/143 (31.47%), Postives = 79/143 (55.24%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMN 577
            PP P   P++G+L  L G +P      +A+ +GP+ +++LG              Q +K+ D NF++R    G++ + Y+  DI+F PY   WR +R+I    L S K +  + ++RQEE+  L R L S+G  PV++ ++++
Sbjct:   35 PPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGSSGGAPVDVTEEVS 177          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.255e-18
Identity = 51/157 (32.48%), Postives = 80/157 (50.96%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGT--EPVNLAQQMNLCVANALGRVMLG 616
            PPGPK  PI+GNL     +  ++   LA  +GP+  L+ GF             + LKI+D    +RP  +G +   YN++DI   P+G  W ++RK+S   LFS K L  ++++ +EE     + L+   T   PVNL + +   V N + R+  G
Sbjct:   29 PPGPKKLPIIGNLHQRRTLHPRNRRNLAEMYGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSRPEAAGMRATFYNFKDIGMAPFGDEWSLMRKLSVVELFSVKKLQSFKYIIEEENNLCVKKLSEFATRQSPVNLERAIFTLVGNIVCRIGYG 185          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.255e-18
Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRAL--ASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G              + LK HD  F+NRP +     +    +D+VF PYG  WR ++ +   +L + K ++ +  VR++E+  +   L  AS+ +   NL++      ++   RV LG
Sbjct:   34 PPSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLSELFITLPSDVTSRVALG 190          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 5.552e-18
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRAL--ASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G              + LK HD  F+NRP +     +    +D+VF PYG  WR ++ +   +L + K +  +  VR+EE+  +   L  AS  +   NL++      ++   RV LG
Sbjct:   34 PPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSELFVTLTSDVTSRVSLG 190          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18
Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRAL--ASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PP P  +P++GNL  +G +PH+S   LA   G +M L  GF             + L+ HD     RP   G++ I+  ++DI F PYG  WR  RK     LF  K +  + ++ +EE   L + L  ++ G  PV+L++ +    A+ L R+  G
Sbjct:   31 PPSPPTFPVIGNLHQVGELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSLFWLAASILFRIAFG 187          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.237e-17
Identity = 59/168 (35.12%), Postives = 77/168 (45.83%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASA-----------GTEP-VNLAQQMNLCVANALGRVMLG 616
            PPGP   P++GNL HL    PH ++  LA  HGP+MYLRLG              + L+  D+ F++RP    A  I Y   D+ F PYG  WRMLRK+  + L +   +     VR  E   L R +  A           G  P VNL + +  C     GR  LG
Sbjct:   28 PPGPWRLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKVVYAAGAGGGGRGQRGEAPVVNLGRLVLSCSMAITGRATLG 195          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.237e-17
Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTE--PVNLAQQMNLCVANALGRVMLG 616
            PP P   P++GNL  +G +PH+S   LA   G +M L LGF             + L+ HD +  +RP   G++ I+  ++D+ F PYG  W+  R+     LF  K L  + ++++ E   L + L+ +  +  PV+L++ +    A+ L RV  G
Sbjct:   31 PPSPPKLPVIGNLHQVGELPHRSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKLSESAVDQSPVDLSKTLFWLAASILFRVAFG 187          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.110e-17
Identity = 49/157 (31.21%), Postives = 81/157 (51.59%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTE--PVNLAQQMNLCVANALGRVMLG 616
            PP P   PI+GNL  L  + H+ +  L++ HGP++ LRLGF             + LK+HD     RP  + +   + + +DI F PYG   R LRK+S  + FS + +  +R++R+EE   + + L  +  +   V+L+Q +   V + + R   G
Sbjct:   30 PPSPPKLPIIGNLHQLRGLFHRCLHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKLKESAKKKNTVDLSQTLFYLVGSIIFRATFG 186          
The following BLAST results are available for this feature:
BLAST of FC876275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
C71BP_ARATH2.492e-1833.12Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71DI_MENSP3.255e-1831.47Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR3.255e-1831.47Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71BF_ARATH3.255e-1832.48Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH3.255e-1830.57Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH5.552e-1831.21Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH7.251e-1831.85Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI1.237e-1735.12Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71BH_ARATH1.237e-1730.57Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71B3_ARATH2.110e-1731.21Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC32002G02EF DevOvary1 Citrus clementina cDNA clone C32002G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876275 ID=FC876275; Name=FC876275; organism=Citrus clementina; type=EST; length=616bp
GGTACCATTTCTACGCTTTCTCTGGGAAACGAAACAAAGAGCAATGTCTA
CTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTGTCATTTCT
TTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCCCACCGTCT
GCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCCTCACTTGG
GCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCCACGGCCCC
CTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCCGCTTCCGC
TTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTTCTCCAACC
GCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATCAGGACATC
GTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAGATCAGCTC
CGCTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCACGTTCGCC
AGGAAGAGATGGCGGAGCTCACGCGCGCGTTGGCGAGTGCAGGAACGGAG
CCTGTGAACTTAGCTCAACAGATGAACTTGTGCGTTGCGAATGCCCTAGG
GAGGGTGATGCTAGGC
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