FC876275

Overview
NameFC876275
Unique NameFC876275
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:11..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.110e-17
Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRAL--ASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G                +K HD   +NRP     + I    +++VF PYG  WR ++ +   HL + K +  +  VR+EE + +   +  AS+ + P+NL++ +    ++   RV  G
Sbjct:   33 PPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSFG 189          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17
Identity = 45/140 (32.14%), Postives = 78/140 (55.71%), Query Frame = 2
Query:  155 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGT--EPVNLAQ 568
            P P  +PI+GNL  LG + HQS+  L++ +GP+M L+LG              Q L+ +D +  +RP  +G + ++YN  D+   PY   W+ LRK+ S  LFS   +   + ++ EE+ ++  ++A + +   PVNL++
Sbjct:   33 PSPPGFPIIGNLHQLGELQHQSLWKLSKKYGPVMLLKLGKVPTLILSSSETAKQALRDYDLHCCSRPSLAGGRELSYNNLDMSSSPYNEYWKELRKLCSQELFSANKIQSIQPIKDEEVKKVIDSIAESSSLKNPVNLSK 172          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17
Identity = 48/144 (33.33%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGT--EPVNLAQQM 574
            PPGP   P +G++ HL G  PH+ +  LA+ +GPLM+L+LG              + LK HD  F++RP       I Y+  DI F PYG  W+ +RKI    + S K++  +  +R +E+  L  ++ S+ +  E VN  +++
Sbjct:   32 PPGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSSSGELVNFKERV 175          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.700e-17
Identity = 46/156 (29.49%), Postives = 84/156 (53.85%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PPGP   P+VG+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   ++R  + G + + Y+  DI+F PY   WR +RKI  + L S + +  +  +RQ+EM+ L R L S+  E V++ +++     + + R   G
Sbjct:   35 PPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERIATLTCSIICRAAFG 190          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.700e-17
Identity = 46/156 (29.49%), Postives = 84/156 (53.85%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PPGP   P+VG+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   ++R  + G + + Y+  DI+F PY   WR +RKI  + L S + +  +  +RQ+EM+ L R L S+  E V++ +++     + + R   G
Sbjct:   35 PPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERIATLTCSIICRAAFG 190          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.700e-17
Identity = 50/159 (31.45%), Postives = 75/159 (47.17%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEE----MAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PP P   P++GNL  L    H+S+  L+  +GPLM L  G                +K HD   +NRP       I    +D+ F PYG  WR ++ I   +L + K +  Y  +R+EE    + +L +A  S+   PVNL+Q +     + + RV LG
Sbjct:   33 PPSPWRLPVIGNLHQLSLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDIICRVALG 191          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.138e-17
Identity = 44/156 (28.21%), Postives = 84/156 (53.85%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVMLG 616
            PPGP   P++G+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   +NR  + G + + Y+ +DI+F PY   WR +RKI  + L S + +  +  +RQ+E++ L R L S+    V++ +++     + + R   G
Sbjct:   36 PPGPPKLPLIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSSAGAAVDMTERIETLTCSIICRAAFG 191          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.047e-16
Identity = 41/141 (29.08%), Postives = 74/141 (52.48%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQM 574
            PPGP+PWP++GNL  + P+  +     A  +GP++ +  G              + LK +D   ++RP N   +  + N QD+++  YGP +  +RK+ +  LF+ K L+  R +R++E+  +  ++  A T P N  + M
Sbjct:   32 PPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPM 172          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.047e-16
Identity = 48/153 (31.37%), Postives = 72/153 (47.06%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVM 610
            PPGPKPWPIVGNL  LG  PH   A LA+T+G +  L++G              + LK HD   S R      +   +    IV+      W+ LRK+    LF+ K ++   HVR+++  E+   L     E V + + +   + N  G ++
Sbjct:   30 PPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVNIFGNLI 182          
BLAST of FC876275 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.047e-16
Identity = 48/153 (31.37%), Postives = 72/153 (47.06%), Query Frame = 2
Query:  152 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSAHLFSGKALDDYRHVRQEEMAELTRALASAGTEPVNLAQQMNLCVANALGRVM 610
            PPGPKPWPIVGNL  LG  PH   A LA+T+G +  L++G              + LK HD   S R      +   +    IV+      W+ LRK+    LF+ K ++   HVR+++  E+   L     E V + + +   + N  G ++
Sbjct:   29 PPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVNIFGNLI 181          
The following BLAST results are available for this feature:
BLAST of FC876275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
C71AF_ARATH2.110e-1729.94Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71BQ_ARATH2.755e-1732.14Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71D6_SOLCH3.599e-1733.33Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C7D95_MENSP4.700e-1729.49Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR4.700e-1729.49Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71AK_ARATH4.700e-1731.45Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71DF_MENPI6.138e-1728.21Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C98A1_SORBI1.047e-1629.08Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C80B2_ESCCA1.047e-1631.37(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA1.047e-1631.37(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32002G02EF DevOvary1 Citrus clementina cDNA clone C32002G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876275 ID=FC876275; Name=FC876275; organism=Citrus clementina; type=EST; length=616bp
GGTACCATTTCTACGCTTTCTCTGGGAAACGAAACAAAGAGCAATGTCTA
CTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTGTCATTTCT
TTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCCCACCGTCT
GCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCCTCACTTGG
GCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCCACGGCCCC
CTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCCGCTTCCGC
TTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTTCTCCAACC
GCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATCAGGACATC
GTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAGATCAGCTC
CGCTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCACGTTCGCC
AGGAAGAGATGGCGGAGCTCACGCGCGCGTTGGCGAGTGCAGGAACGGAG
CCTGTGAACTTAGCTCAACAGATGAACTTGTGCGTTGCGAATGCCCTAGG
GAGGGTGATGCTAGGC
back to top