FC876286
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER1_PLEBO (Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.897e-14 Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 199 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 +P+ KVT+ + G+ VP+D+YIL AE Q I LP++CR C++CA +I +G + Q + + + GY L CV YP+SD + T E+ Sbjct: 1 MPSFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQSDQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEE 96
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.354e-14 Identity = 48/147 (32.65%), Postives = 69/147 (46.94%), Query Frame = 1 Query: 43 SSCCRKPPLHRQLTSSTYNNTRNPSSLKCRPRKTVSSELQTTAGVNGSYSPSIPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDE 483 S+ K L Q T+ N S+ R + S L+ +A G+ ++ K+ D G EF V +DQYIL AE + LP++CR C++CA +I SG + Q + + KGY L CV YP SD + T E Sbjct: 8 STSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAVYKVKLLGPD---GQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKE 151
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER_BUMFI (Ferredoxin OS=Bumilleriopsis filiformis PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 205 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 T+ VT+ + + + P+DQ+IL AE Q I LP++CR C++CA ++ SG I Q E + + G+ L CV YP+SD +V+T ED Sbjct: 2 TYSVTLVNEEKNINAVIKCPDDQFILDAAEEQGIELPYSCRAGACSTCAGKVLSGTIDQSEQSFLDDDQMGAGFLLTCVAYPTSDCKVQTHAED 95
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 238 GVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 G HEF P+D YIL AE+ + LPF+CR C++CA R+ +G++ Q E + ++GY L C+ YP +D + T E+ Sbjct: 70 GTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKEE 152
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER_CHLFR (Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 205 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 T+KVT+ + G+ V +D YIL AE + LP++CR C++CA +IKSG + Q + + + GY L CV YP+SD +ET E+ Sbjct: 3 TYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEE 96
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FERA_ALOMA (Ferredoxin-A OS=Alocasia macrorrhiza PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 250 EFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 EF P+D YIL AE + I LP++CR C+SCA ++K G++ Q + + E +G+ L CV +P+SDV +ET E+ Sbjct: 15 EFDCPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVKQGEVDQSDGSFLDDEQMEQGWVLTCVAFPTSDVVIETHKEE 93
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER1_SYNP6 (Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petF1 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 205 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 T+KVT+ + G+ V +D YIL AE Q I LP++CR C++CA ++ SG + Q + + + + G+ L CV YP+SDV +ET E+ Sbjct: 3 TYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEE 96
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER1_SYNE7 (Ferredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=petF PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 205 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 T+KVT+ + G+ V +D YIL AE Q I LP++CR C++CA ++ SG + Q + + + + G+ L CV YP+SDV +ET E+ Sbjct: 3 TYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEE 96
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER_SILPR (Ferredoxin, chloroplastic OS=Silene pratensis GN=PETF PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 46/143 (32.17%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 85 SSTYNNTRNPSSLKCRPRKTVSSELQTT---------AGVNGSYSPSIPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 +ST + +SL + + V+S L T AG G + ++ T+KVT+ + G V F P+D Y+L AE + I LP++CR C+SCA ++ +G + Q + + + G+ L C YPS+DV +ET E+ Sbjct: 2 ASTLSTLSVSASLLPKQQPMVASSLPTNMGQALFGLKAGSRGRVT-AMATYKVTLITKESGTV-TFDCPDDVYVLDQAEEEGIDLPYSCRAGSCSSCAGKVVAGSVDQSDQSFLDDDQIEAGWVLTCAAYPSADVTIETHKEE 142
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FERB_ALOMA (Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 250 EFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 EF P+D YIL AE + I LP++CR C+SCA ++K+G + Q + + + +G+ L CV YP+SDV +ET E+ Sbjct: 16 EFECPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVKNGNVDQSDGSFLDDDQIGEGWVLTCVAYPTSDVVIETHKEE 94 The following BLAST results are available for this feature:
BLAST of FC876286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876286 ID=FC876286; Name=FC876286; organism=Citrus clementina; type=EST; length=488bpback to top |