FC876286
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER1_SPIOL (Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 5.415e-13 Identity = 42/125 (33.60%), Postives = 63/125 (50.40%), Query Frame = 1 Query: 112 PSSLKCRPRKTVSSELQTTAGVNGSYSPSIPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 P + P T S G G ++ +KVT+ V EF P+D YIL AE + I LP++CR C+SCA ++K+G + Q + + + +G+ L C YP SDV +ET E+ Sbjct: 22 PPMMAALPSNTGRSLFGLKTGSRGGRM-TMAAYKVTLVTPTGNV--EFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSDVTIETHKEE 143
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER5_MAIZE (Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.072e-13 Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 250 EFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 E VP+D YIL AE + I LP++CR C+SCA ++ SG + Q + + + G+ L CV YP+SDV +ET ED Sbjct: 53 ELQVPDDVYILDYAEEEGIDLPYSCRAGSCSSCAGKVVSGSLDQSDQSFLDDSQVADGWVLTCVAYPTSDVVIETHKED 131
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER_THEVL (Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=petF1 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 205 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 T+KVT+ R G VPED+YIL AE Q + LPF+CR C++CA ++ G++ Q + + + KG+ L CV YP SD ++ T E+ Sbjct: 3 TYKVTLV-RPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEE 95
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER_THEEB (Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1) GN=petF1 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 205 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 T+KVT+ R G VPED+YIL AE Q + LPF+CR C++CA ++ G++ Q + + + KG+ L CV YP SD ++ T E+ Sbjct: 3 TYKVTLV-RPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEE 95
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER_SYNEN (Ferredoxin-1 OS=Synechococcus elongatus naegeli GN=petF1 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 205 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 T+KVT+ R G VPED+YIL AE Q + LPF+CR C++CA ++ G++ Q + + + KG+ L CV YP SD ++ T E+ Sbjct: 3 TYKVTLV-RPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEE 95
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER1_ORYSJ (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. japonica GN=ADI1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 250 EFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 E VP+D YIL AE + I LP++CR C+SCA ++ SG+I Q + + + + G+ L C YP SDV +ET ED Sbjct: 58 ELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKED 136
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER1_ORYSI (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. indica GN=ADI1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 250 EFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 E VP+D YIL AE + I LP++CR C+SCA ++ SG+I Q + + + + G+ L C YP SDV +ET ED Sbjct: 58 ELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKED 136
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 265 EDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 ED Y+L AE + LP++CR C+SCA ++ SG I Q + + E S+GY L CV YP+SDV +ET E+ Sbjct: 72 EDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKEE 145
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER1_APHFL (Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 205 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 T+KVT+ D G P+D YIL AE + LP++CR C++CA ++ +G I Q + + + GY L CV YP+SDV +ET E+ Sbjct: 3 TYKVTLIDA-EGTTTTIDCPDDTYILDAAEEAGLDLPYSCRAGACSTCAGKLVTGTIDQSDQSFLDDDQVEAGYVLTCVAYPTSDVTIETHKEE 95
BLAST of FC876286 vs. ExPASy Swiss-Prot
Match: FER_SYNLI (Ferredoxin OS=Synechococcus lividus PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.206e-12 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 259 VPEDQYILHTAESQNITLPFACRHRCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 486 VPED+YIL AE Q + LPF+CR C++CA ++ G++ Q + + + KG+ L CV YP SD ++ T E+ Sbjct: 19 VPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTHQEE 94 The following BLAST results are available for this feature:
BLAST of FC876286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876286 ID=FC876286; Name=FC876286; organism=Citrus clementina; type=EST; length=488bpback to top |