FC876289

Overview
NameFC876289
Unique NameFC876289
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_YEAST (Protein transport protein SEC13 OS=Saccharomyces cerevisiae GN=SEC13 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.051e-40
Identity = 82/156 (52.56%), Postives = 101/156 (64.74%), Query Frame = 1
Query:   97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 564
            I   H + +HD  +DYYGKRLAT SSD +IKI  V   T + +  L+GH+G VW V WAHPKFG+ILASCS+DG V+IWKE N   W +  V   H +SVNS+ WAPHE G  L   SSDG +SV   + +G      ID AH +GV S SWAP+T
Sbjct:    4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN-GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPAT 157          
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_CRYNE (Protein transport protein SEC13 OS=Cryptococcus neoformans GN=SEC13 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.569e-40
Identity = 89/182 (48.90%), Postives = 114/182 (62.64%), Query Frame = 1
Query:   58 PLV*ALEKMPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQ-HLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-------GNSNE----W--IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 561
            PL+ + +   P  +ET HED +HD  +DYYGKRLAT SSD +I+I  V    ++     L GH  AVW+V+WAHP FGSILASCS+DG V IWKE       G+  E    W  IK+H    H +SVNSI WAP++LG  LAC SSDG +SV + + DG  + + I  AH  G  ++SWAPS
Sbjct:    5 PLIQSAQASKPVPVETQHEDMIHDAQLDYYGKRLATCSSDRTIRIFNVIKGEAKGEPVILKGHTAAVWQVSWAHPSFGSILASCSYDGRVFIWKEVGQGQGKGSGGELQDGWERIKEHTL--HTASVNSIAWAPYDLGPILACASSDGKVSVLSFQNDGSIEVN-IFPAHGTGANAISWAPS 183          
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_PICST (Protein transport protein SEC13 OS=Pichia stipitis GN=SEC13 PE=3 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 7.794e-40
Identity = 88/178 (49.44%), Postives = 105/178 (58.99%), Query Frame = 1
Query:   97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK-LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP--STAPGALVGSGFLDQFRSFV 618
            I   H D +HD  +DYYGKRLAT SSD SI I  +    S  L   L+GH G VW+V+WAHPKFGSILASCSFDG  +IWKE   + +W        H++SVNS+ WAPHELG  L C SSDG +SV     D G  +  +  AH +G  S SWAP  ST       +  L Q R FV
Sbjct:    4 IGNAHNDLIHDAVLDYYGKRLATCSSDKSINIFDIDGTESYKLVSTLTGHDGPVWQVSWAHPKFGSILASCSFDGKALIWKEQPETQQWSIIAEHSVHQASVNSVSWAPHELGAVLLCASSDGKVSVVDFN-DDGTTSHVVFDAHAIGANSASWAPLSSTPSPNQKDAASLKQQRRFV 180          
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_DEBHA (Protein transport protein SEC13 OS=Debaryomyces hansenii GN=SEC13 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.794e-40
Identity = 84/158 (53.16%), Postives = 104/158 (65.82%), Query Frame = 1
Query:   97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK-LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEW--IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 558
            I   H+D +HD  +DYYGKRLAT SSD +IK+  V    +  L + L GH+G VW+VAWAHPKFGSILASCS+DG  +IWKE   + +W  I +H    H++SVNS+ WAPHELG  L C SSDG +SV     D G  +  I  AH +GV S SWAP
Sbjct:    4 IGNAHDDLIHDAVLDYYGKRLATCSSDKTIKLFEVEGTENYKLVETLIGHEGPVWQVAWAHPKFGSILASCSYDGKALIWKEQPETQQWSIIAEHTV--HQASVNSVSWAPHELGAILLCTSSDGKVSVVDFN-DDGTTSHIIFDAHAIGVNSASWAP 158          
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_KLULA (Protein transport protein SEC13 OS=Kluyveromyces lactis GN=SEC13 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.018e-39
Identity = 85/178 (47.75%), Postives = 106/178 (59.55%), Query Frame = 1
Query:   97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST----APGALVGSGFLDQFRSFV 618
            I   H + +HD  +DYYGKRLAT SSD+++KI  V   T + +  L GH+G VW+V WAHPKFG ILASCS+DG V+IWKE N   W +    E H +SVNSI WAPHE G  L   SSDG +SV   + +G      ID AH +G  +  WAP+T    +     GS    Q R FV
Sbjct:    4 INNAHSELIHDAVLDYYGKRLATCSSDHTVKIFEVEGETHKLVDTLQGHEGPVWQVDWAHPKFGVILASCSYDGKVLIWKEVN-GRWSQIAAHEVHSASVNSIQWAPHEYGPLLLAASSDGKVSVVEFKENGTTSPIIID-AHSIGANTACWAPATLQQQSNQGTSGSASPQQVRRFV 179          
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_ASHGO (Protein transport protein SEC13 OS=Ashbya gossypii GN=SEC13 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.018e-39
Identity = 79/156 (50.64%), Postives = 101/156 (64.74%), Query Frame = 1
Query:   97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 564
            I   H + +HD  +DYYGKRLAT SSD +I+I  V  ++ + +  L GH+G VW+V WAHPKFG ILASCS+DG V+IWKE N   W +   +E H +SVNS+ WAPHE G  L C SSDG  SV   + +G      ID AH +GV +  WAP+T
Sbjct:    4 ITNAHTELIHDAVLDYYGKRLATCSSDKTIQIFEVDGDSHKLVDSLHGHEGPVWQVDWAHPKFGVILASCSYDGKVLIWKEEN-GRWSQIAAYEVHSASVNSVKWAPHEYGPLLLCSSSDGKFSVVEFKENGTTSPIIID-AHAIGVNAACWAPAT 157          
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_MAGGR (Protein transport protein SEC13 OS=Magnaporthe grisea GN=SEC13 PE=3 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.329e-39
Identity = 82/159 (51.57%), Postives = 104/159 (65.41%), Query Frame = 1
Query:  112 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 588
            ++  HD  +DYYG+RLAT SSD +IKI  V   T +    L GH+GAVW VAWAHPK+G+ILAS  +DG V IW+E     W K   F  HK+SVN + W+PHE G  LAC SSDG++SV   + D  +D      AH  GV SVSWAPSTAPG+++ +
Sbjct:    6 KERAHDAVLDYYGRRLATCSSDRTIKIFEVEGETHRLTETLKGHEGAVWCVAWAHPKYGNILASSGYDGKVFIWRE-QGGAWQKIFDFALHKASVNIVSWSPHESGCLLACASSDGHVSVLEFK-DNSFDHQTF-LAHGQGVNSVSWAPSTAPGSIIST 161          
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_CANAL (Protein transport protein SEC13 OS=Candida albicans GN=SEC13 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.268e-39
Identity = 81/158 (51.27%), Postives = 105/158 (66.46%), Query Frame = 1
Query:   97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEW--IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 558
            I   H+D +HD  +DYYGKRLAT SSD +IKI  + G +  + +  L+GH+G VW+V+WAHPKFGSILASCS+DG  +IWKE   + +W  I +H    H++SVNS+ WAPHELG  L C SSDG +SV     D G  +  I  AH +G  S +WAP
Sbjct:    4 IGNAHDDLIHDAVLDYYGKRLATCSSDKTIKIFDLDGTDNYKLITTLTGHEGPVWQVSWAHPKFGSILASCSYDGKALIWKEQPETQQWSIIAEHTV--HQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFN-DDGTTSHVIFDAHAIGANSATWAP 158          
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_YARLI (Protein transport protein SEC13 OS=Yarrowia lipolytica GN=SEC13 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.125e-38
Identity = 79/160 (49.38%), Postives = 101/160 (63.12%), Query Frame = 1
Query:  109 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW--IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV 582
            H+D +HD  +DYYGKRLAT SSD +IKI  +  +  + +  L GH+G VW+V+WAHPKFGSI+AS S+DG V IW+E N   W  I  H    H +SVNS+ WAP E G  L C SSDGN+SV   +  G  + +    AH VG  S SWAP    G+L+
Sbjct:    8 HDDLIHDAVLDYYGKRLATCSSDKTIKIFEIDGDNHKLVETLRGHEGPVWQVSWAHPKFGSIIASASYDGKVFIWREEN-GRWTNIAQH---QHNASVNSVVWAPQEYGPLLLCASSDGNVSVVEFKEGGNCEATTF-AAHDVGANSASWAPPAVSGSLI 162          
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_PHANO (Protein transport protein SEC13 OS=Phaeosphaeria nodorum GN=SEC13 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.470e-38
Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 1
Query:  124 HDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 588
            HD  +DYYG+RLAT SSD +IKI  V  +    +  L GH+G VW VAWAHPK+G+ILAS S+DG VIIW+E  S+ W K +    H +SVN + WAPHE+G  LAC SSDGN+SV   + D  W +  I QA   GV SVSWAP+ APG +V +
Sbjct:   20 HDAVLDYYGRRLATCSSDKTIKIFEVEGDKHTLVETLRGHEGPVWCVAWAHPKYGNILASSSYDGKVIIWRE-QSSTWQKIYEVALHTASVNIVAWAPHEVGCLLACASSDGNVSVLEFK-DNAW-SHVIFQACGSGVNSVSWAPAVAPGQVVSA 171          
The following BLAST results are available for this feature:
BLAST of FC876289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
SEC13_YEAST2.051e-4052.56Protein transport protein SEC13 OS=Saccharomyces c... [more]
SEC13_CRYNE4.569e-4048.90Protein transport protein SEC13 OS=Cryptococcus ne... [more]
SEC13_PICST7.794e-4049.44Protein transport protein SEC13 OS=Pichia stipitis... [more]
SEC13_DEBHA7.794e-4053.16Protein transport protein SEC13 OS=Debaryomyces ha... [more]
SEC13_KLULA1.018e-3947.75Protein transport protein SEC13 OS=Kluyveromyces l... [more]
SEC13_ASHGO1.018e-3950.64Protein transport protein SEC13 OS=Ashbya gossypii... [more]
SEC13_MAGGR1.329e-3951.57Protein transport protein SEC13 OS=Magnaporthe gri... [more]
SEC13_CANAL2.268e-3951.27Protein transport protein SEC13 OS=Candida albican... [more]
SEC13_YARLI1.125e-3849.38Protein transport protein SEC13 OS=Yarrowia lipoly... [more]
SEC13_PHANO1.470e-3853.55Protein transport protein SEC13 OS=Phaeosphaeria n... [more]

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Properties
Property NameValue
Genbank descriptionC32003A01EF DevOvary1 Citrus clementina cDNA clone C32003A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876289 ID=FC876289; Name=FC876289; organism=Citrus clementina; type=EST; length=665bp
TCTGGAGATTGCGAACGCTGTCGTTTCGTCCCTTCCGATCTTCATCCTCA
CAAGGGACCCTTGGTGTAAGCACTAGAGAAAATGCCACCTCAAAAGATTG
AAACTGGTCATGAGGACACAGTACATGATGTGGCGATGGATTACTATGGC
AAGCGCCTCGCCACGGCATCTTCGGATTACTCAATTAAGATCATTGGTGT
GGGCAATAACACCTCTCAGCATCTCGCAAAGCTTAGTGGTCATAAAGGTG
CTGTTTGGGAGGTGGCTTGGGCTCACCCAAAATTTGGGTCTATACTTGCA
TCCTGTTCTTTTGACGGGACTGTCATAATATGGAAGGAGGGTAACAGTAA
TGAGTGGATCAAAGATCATGTTTTTGAGGACCACAAATCGTCAGTCAATT
CGATTGATTGGGCGCCTCATGAGCTCGGTCTATGTTTGGCTTGTGGTTCG
TCAGATGGGAACATATCAGTTTTTACGGCTAGAGCTGATGGCGGCTGGGA
TACATCTAGGATTGACCAAGCTCATCCGGTTGGTGTGACTTCAGTTTCAT
GGGCCCCATCAACAGCTCCCGGTGCACTTGTGGGTTCTGGTTTTCTTGAC
CAGTTCAGAAGCTTTGTTCAGGTGGTTGTGATAATACGTGAAGGTGTGGA
GCTGTACATGGATTT
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