FC876289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: CIAO1_DANRE (Probable cytosolic iron-sulfur protein assembly protein ciao1 OS=Danio rerio GN=ciao1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11 Identity = 50/154 (32.47%), Postives = 72/154 (46.75%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 558 + GH+ TV VA GK LA+AS D + I + + L L GH+ V VAWA GS+LA+CS D +V IW+ +E+ V H V + W P + LA S D I ++ D W+ + H V S+++ P Sbjct: 56 LSDGHQRTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWA--PSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQ--ELLASASYDNKICIY-KEEDDDWECRATLEGHESTVWSLTFDP 204
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: CIAO1_DROYA (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila yakuba GN=Ciao1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.928e-11 Identity = 40/111 (36.04%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 232 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 561 L GHKG +W VAW HPK G++ ASC D + IW N W + D HK ++ I W+P G LA S D +++ +++ G ++ + + H V SVSW+ S Sbjct: 10 LQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSL-TGNTWSTKTILSDGHKRTIREIQWSP--CGQYLASASFDATTAIW-SKSSGEFECNATLEGHENEVKSVSWSRS 114 HSP 2 Score: 67.0106 bits (162), Expect = 9.928e-11 Identity = 46/153 (30.07%), Postives = 73/153 (47.71%), Query Frame = 1 Query: 106 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 561 GH+ + VA G A+ D +I+I + NT LS GHK + E+ W+ G LAS SFD T IW + +S E+ + E H++ V S+ W+ G LA S D ++ ++ D ++ + + +H V V W P+ Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWS--PCGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPT 159 The following BLAST results are available for this feature:
BLAST of FC876289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876289 ID=FC876289; Name=FC876289; organism=Citrus clementina; type=EST; length=665bpback to top |