FC876292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 36/72 (50.00%), Postives = 45/72 (62.50%), Query Frame = 3 Query: 435 EQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 650 +Q + ++ R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+NFP+ Sbjct: 25 DQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPE 96
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 39/69 (56.52%), Postives = 45/69 (65.22%), Query Frame = 3 Query: 444 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 650 +KS R+R YRG+RQRPWGKWAAEIRDP K RVWLGTF+T RG KAK+NFP+ Sbjct: 61 EKSNSRQRN--YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPE 127
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 40/86 (46.51%), Postives = 50/86 (58.14%), Query Frame = 3 Query: 414 STAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 671 +TA E + S ++ R+ +YRG+RQRPWGKWAAEIRDP K RVWLGTF+ RG KAK+NFP+ P Sbjct: 165 TTATASSETSSFSGDQPRR-RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENVKLVRP 249
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 35/62 (56.45%), Postives = 40/62 (64.52%), Query Frame = 3 Query: 465 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 650 R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+NFP+ Sbjct: 86 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPE 147
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 40/81 (49.38%), Postives = 47/81 (58.02%), Query Frame = 3 Query: 438 QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPRA 677 + K + K YRG+RQRPWGK+AAEIRDP K G RVWLGTF+T +RG KA +NFP E PRA Sbjct: 143 EVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKPRA 223
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = 3 Query: 402 KSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPA 662 KS G + V T RK+ +RG+RQRPWG+WAAEIRDPT+G RVWLGT++T ++G A NFP T A Sbjct: 76 KSIGDRKRRSVSPDSDVTRRKK---FRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTA 159
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 38/74 (51.35%), Postives = 45/74 (60.81%), Query Frame = 3 Query: 462 KRKNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPRAQ 680 + K YRG+R RPWGK+AAEIRDPT +G RVWLGTF T +RG KA +NFP E PRA+ Sbjct: 132 EEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEVDKWNPRAE 205
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 3 Query: 474 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 ++RG+RQRPWGKWAAEIRDP++ VRVWLGTF+T +RG A++NFP Sbjct: 86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP 143
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 3 Query: 468 KNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 653 K YRG+RQRPWGK+AAEIRDP KG RVWLGTF+T +RG KA VNFP E Sbjct: 142 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLE 204
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 3 Query: 468 KNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 653 K YRG+RQRPWGK+AAEIRDP KG RVWLGTF+T +RG KA VNFP E Sbjct: 135 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLE 197 The following BLAST results are available for this feature:
BLAST of FC876292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876292 ID=FC876292; Name=FC876292; organism=Citrus clementina; type=EST; length=709bpback to top |