FC876292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 35/73 (47.95%), Postives = 44/73 (60.27%), Query Frame = 3 Query: 453 TERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 671 T+ ++ YRG+R+RPWG++AAEIRDP K RVWLGTF+T RG KAK NFP T +P Sbjct: 19 TDGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPSPTENQSP 91
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 3 Query: 459 RKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 R++ QYRG+R+RPWGK+AAEIRDP K G RVWLGT+ T +RG KAK+NFP Sbjct: 86 RQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 399 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 671 R+ GS+AV ++ ++RG+R+RPWG++AAEIRDP K RVWLGTF++ +RG KAK NFP ++ + P Sbjct: 2 RRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPP 92
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 3 Query: 450 STERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 ST R+ YRG+R+RPWG++AAEIRDP K RVWLGTF+T +RG KAK NFP Sbjct: 3 STTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP 68
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 46/112 (41.07%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 330 MVTWTLMPT**WLILSLFTFSAGRKSHGSTAVKHVEQAKKST-----ERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 MV +TL+ + S F FSAG + V ++T E R YRG+R+RPWGK+AAEIRDP K G RVWLGT+ T +RG KA +NFP Sbjct: 51 MVIYTLLKDALNVGWSPFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFP 162
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 37/87 (42.53%), Postives = 50/87 (57.47%), Query Frame = 3 Query: 390 SAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 S+ + S V+ V KK+ + YRG+R+RPWGK+AAEIRDP KG R+WLGTF + +RG+KA +NFP Sbjct: 78 SSSSSTTTSPEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 40/90 (44.44%), Postives = 49/90 (54.44%), Query Frame = 3 Query: 399 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAA 668 R + V V A +T ++K +RG+RQRPWGKWAAEIRDP K VR+WLGT+NT +RG A NF TP A Sbjct: 98 RAVKSESTVSPVVSATTTTTGEKK--FRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF-SVTPTTA 184
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 38/91 (41.76%), Postives = 50/91 (54.95%), Query Frame = 3 Query: 399 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 671 RK GS+ V K +YRG+R+RPWG++AAEIRDP K RVWLGTF++ +RG KAK NFP + ++P Sbjct: 2 RKGRGSSVVGPALPVTAGGSVKEP-RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSP 91
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 3 Query: 456 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 E+ ++ +YRG+R+RPWG++AAEIRDP K RVWLG+FNT RG KA NFP Sbjct: 46 EKSKEVRYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFP 109
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 3 Query: 468 KNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 653 + YRG+R+RPWGK+AAEIRDP KGVRVWLGTF+T +RG KA +NFP E Sbjct: 69 QRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLE 131 The following BLAST results are available for this feature:
BLAST of FC876292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876292 ID=FC876292; Name=FC876292; organism=Citrus clementina; type=EST; length=709bpback to top |